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Name : aspC (HMPREF0421_20226) Accession : YP_003985333.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : aspartate aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : 2.6.1.1 Position : 259678 - 261204 bp Length : 1527 bp Strand : - Note : COG: COG0436; Pfam: PF00155; InterPro: IPR004839 DNA sequence : ATGGCACAAAATTTTGCAAACGACCTTAAAAAGGCCATGAAAATCAAAGGATATAAGCAGATTGATGTAATCGCGCTTGC AGCAAAAGATGGTCATAAGCTTGGCAAAAGTCAGTTAAGCCAGTATTTAAGCGGTAAAACTGAGCCACGCAAAGACGTGC GAGATATGCTTGCACAAATTCTTGAAATTAGCGACTACGGAATCAAAGGTGGGCATTCTTGCGCAAAAACCGCGCAAAAC TGCCAGTCTGTAGAAGAATCACAATTAAATCAGCCACATCTTACAGAGGAAGAGCTTTCCAAAACGCTCAAACATAGAAA CTTCAACAAATCCACCAAACTTGAGCACGTGCTTTACGATGTCCGCGGCCCAGTTGTAGAAGAAGCAAACCGCATGGAAG CAAACGGAACGCATATTCTAAAGCTCAACATTGGGAATCCTGCTCCTTTTGGCTTCCGCGCTCCAGACGAAGTAATTTAC GACATGCAGCAGCAGCTTATTGATTGCGAAGGCTACTCGGACAGTCGCGGACTTTTCTCTGCGCGCAAGGCGATTATGCA ATACGATCAACTTAAGGGCATTCCAGGCGTGCAAATGGAAGATATTTACACTGGAAACGGCGTTTCCGAGCTGATTAACC TTTCTATGCAAGCACTGCTTGATTGCGGCGACGAGATTCTTATACCAAGCCCAGACTATCCGCTGTGGACTGCGTGCGCA AGCTTGGCTGGCGGCACTCCTGTGCACTACATGTGTGACGAAAAGTCGCATTGGTACCCAGATATTGCCGACATTCGCTC TAAAATCACGCCTCGCACTAAAGCAATCGTGATTATTAACCCGAATAATCCTACGGGCGTGCTGTATAGTCGCGAAGTTT TGGAAGAGATTGTTAAGATTGCGCGCGAGTTTAATCTGATTATTTTTGCGGACGAGATTTACGACCGTCTTGTTATGGAC GACAAGAAGCATGTTTCGATTGCTTCTCTTGCTCCAGACGTGTTCTGCGTAACTTTTAGCGGACTTTCTAAGTCGCATAT GATTGCTGGCTTCCGTATTGGTTGGATGAGTCTTTCGGGAGATAAATCCAAGGCTCGCGACTACATTATGGGGCTTAACA TGCTGTCTAATATGCGCTTGTGCTCGAATGTTCCTGCGCAATCTATTATTCAGACTGCTTTAGGCGGATACCAAAGCGTT GAGAAGTATTTGGAGCCGGGCGGACGCGTGTATGAGCAGCGAGAGTACTGCTATAACGCACTTCAGGAGATGGATGGCGT AAGCGTCGAGCGACCAGATGCTGCTTTCTACATGTTTGTAAAACTCGATCCTGCTCGCTACAACATTCACGACGACGAAC AGTTTGCGCTTGATTTGCTGCGCGACCAGAAGTTGCTGATTGTGCACGGCAAAGGCTTTAATTGGCAGACTCCAGGCTAC TTCCGCGTAGTCTACTTGCCGCGCTTGCAAACGCTTCGCGACGCAATGAGCAAACTCTCTAACTTCCTCTCCTACTATCG CCAGTAG Protein sequence : MAQNFANDLKKAMKIKGYKQIDVIALAAKDGHKLGKSQLSQYLSGKTEPRKDVRDMLAQILEISDYGIKGGHSCAKTAQN CQSVEESQLNQPHLTEEELSKTLKHRNFNKSTKLEHVLYDVRGPVVEEANRMEANGTHILKLNIGNPAPFGFRAPDEVIY DMQQQLIDCEGYSDSRGLFSARKAIMQYDQLKGIPGVQMEDIYTGNGVSELINLSMQALLDCGDEILIPSPDYPLWTACA SLAGGTPVHYMCDEKSHWYPDIADIRSKITPRTKAIVIINPNNPTGVLYSREVLEEIVKIAREFNLIIFADEIYDRLVMD DKKHVSIASLAPDVFCVTFSGLSKSHMIAGFRIGWMSLSGDKSKARDYIMGLNMLSNMRLCSNVPAQSIIQTALGGYQSV EKYLEPGGRVYEQREYCYNALQEMDGVSVERPDAAFYMFVKLDPARYNIHDDEQFALDLLRDQKLLIVHGKGFNWQTPGY FRVVYLPRLQTLRDAMSKLSNFLSYYRQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-112 | 56 |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-112 | 56 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-112 | 56 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 1e-112 | 56 |
