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Name : malL (HMPREF0421_20204) Accession : YP_003985313.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : oligo-1,6-glucosidase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 232279 - 234222 bp Length : 1944 bp Strand : + Note : COG: COG0366; Pfam: PF00128; InterPro: IPR013781 DNA sequence : ATGACTACTTTTGACAGATCGAATTTGCCAGAATCCGTGCGCACAAACGGTGCTACGCCAAACCCTTGGTGGGCGAATGC AGTTGTGTATCAGATTTATCCGCGAAGCTTCCAAGATACTAACGGCGACGGAATCGGTGATTTGAAGGGCATTACTTCGC GTCTTGATTATTTGGCTGATTTAGGTGTTGACGTGCTTTGGCTTAGTCCTGTTTACAAGTCTCCGCAAGACGATAACGGC TACGATATTTCCGATTATCAAGATATTGATCCGCTTTTTGGCACTCTAGAAGATATGGACGAGCTTCTGGCAGAAGCGCA CAAGCGCGGGCTTAAGATTGTGATGGATTTAGTAGTAAATCACACTTCCGACGAGCACGCTTGGTTCCAGGCTTCAAGAG ATGCTTCTAGCGACTACGCGGATTGGTATTGGTGGAGACCAGCGCGCAAAGGTTGCGTTCCTGGGGAGCCAGGTGCTGAG CCAAATAAGTGGGGCTCGTATTTTGGCGGTTCTGCGTGGACTTACGATCCAAAGCGCGGCGAATATTACTTCCACCAGTA TTCGCCAAAGCAGCCAGATTTGAATTGGGAAAATCCTGCGGTTCGTGCTGCCGTGTACAAGATGATGAATTGGTGGATGG ATCGCGGAATTGACGGCTTCCGTATGGATGTGATTACGCAAATTTCTAAGCGCGTAGATAGCGAAGGACGTTTGCCAGGG GAATACGGTTCGCAGATTGAAGATGCGCCAGCAGGCGACGACGGCTACTCTTCGCCGTATTTCTTCTGCTCCGATGGCCC TCGTTTAGACGAGTTTTTGCGCGAGATGCGCGAGGCGGTTTTCAAGGGTCGTGAAGGTTTCTTAACTGTTGGCGAGGCTC CTGGAATTTCCGCGCATCGAAACACTTATATTACAAATCCTGCTAATGGTGAGCTAGACATGCTCTTCTTGTTCGATCAA GTTAATGTTGATTGCGCAAATGGCACTAAGTGGAATCCTATTCCTCTTAAGTTGACGGCATTAAAGCGCGCAATGGCAGA TCAGCAGCAGGCAGTTAGCGAGGCTGGTTGGGCGAGCCTGTTCTTTAATAATCACGATCAACCGCGTGCGCTTTCTCGCT GGGGTAGTGAGGCTAGCGATGAGATGCGCGTGCTTTCCGCTAAGGCGATTGCAATGCTCTTGCACATGCACCGCGGCACT CCGTATGTGTATCAGGGTGAAGAAATTGGCATGACAAACGCGCACTTTACGAGTCTCGAGCAGTATCGCGATTTGGAAGC GTTAAATATGTTTAAGCAGCGCGTAGAAGAAGCGCATATTCAGTCGGCTGAGTCGATGATGGATGCGCTCGCAAAGCGCG GTCGCGATAATTCTCGAACGCCTATGCAATGGAATGCGTCTCAATATGCGGGATTCATGCCTTTTAATGTTCCGTCGCAA AATAATGCACAGCCGTGGATTAGCGTGAATCCTAATTATGTAGATATTAATGCGGCGGAGCAAATGGAAGATTCGGATTC CGTTTACTCGTTCTACAAGCGTTTGATTGAGTTGCGCCATTCGCAGCCTGTTGTTTCGGCTGGTTCTTGGAATTTGGTTG ATGCGGATGACGAGTGCGTTTACGCGTTTGTTAGGCAGGTTGAGCAGACTTGTGAGAATGCTAAGGCAGATGAGGCAGGT CTTGAGAATGGTGTGCGTTCTTCAAGCGCGGTTGCTGGCGATTCTTCCTCTGTCTCGATAAAGAAGCTGCTCGTAATGGT AAATATGACGGATTCGTCTGTGGCAATACCTGCTCAAAGTGCCGAATTGTTGCGTAATATCGCCTCTAATGGCGTATCGT ATGATGATGTGATGATTTCTACCTACAGCGCGGATCATGCTCTTAAATCACTTAAAAATGGCACGCTTGCGCCTTGGGAG GGAATCGCTGTTAGCTTGCAATAA Protein sequence : MTTFDRSNLPESVRTNGATPNPWWANAVVYQIYPRSFQDTNGDGIGDLKGITSRLDYLADLGVDVLWLSPVYKSPQDDNG YDISDYQDIDPLFGTLEDMDELLAEAHKRGLKIVMDLVVNHTSDEHAWFQASRDASSDYADWYWWRPARKGCVPGEPGAE PNKWGSYFGGSAWTYDPKRGEYYFHQYSPKQPDLNWENPAVRAAVYKMMNWWMDRGIDGFRMDVITQISKRVDSEGRLPG EYGSQIEDAPAGDDGYSSPYFFCSDGPRLDEFLREMREAVFKGREGFLTVGEAPGISAHRNTYITNPANGELDMLFLFDQ VNVDCANGTKWNPIPLKLTALKRAMADQQQAVSEAGWASLFFNNHDQPRALSRWGSEASDEMRVLSAKAIAMLLHMHRGT PYVYQGEEIGMTNAHFTSLEQYRDLEALNMFKQRVEEAHIQSAESMMDALAKRGRDNSRTPMQWNASQYAGFMPFNVPSQ NNAQPWISVNPNYVDINAAEQMEDSDSVYSFYKRLIELRHSQPVVSAGSWNLVDADDECVYAFVRQVEQTCENAKADEAG LENGVRSSSAVAGDSSSVSIKKLLVMVNMTDSSVAIPAQSAELLRNIASNGVSYDDVMISTYSADHALKSLKNGTLAPWE GIAVSLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-108 | 44 |
