|
Name : nagB (HMPREF0421_20181) Accession : YP_003985290.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : glucosamine-6-phosphate deaminase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0363 EC number : 3.5.99.6 Position : 203738 - 204607 bp Length : 870 bp Strand : + Note : COG: COG0363; Pfam: PF01182; InterPro: IPR004547 DNA sequence : TTGCTTGGAGTATTTGCAGAATCAAAAATCACCAAAGCTTTAAAGGAGAAGCTAAAGATGGCTGAAGTTATTATTGTAAA AGATCAGGATGAGGCAGGCGAGCTATACGCCGAATCTGTTGTAGATTTGATTAGTCGCAAGCCAGACGCAGTACTAGGGT TGGCAACAGGATCAAGCCCATTAAAAGCCTACGAGCATCTTGCAAAGCTTGTAAAAGACAAGAATGTTGACGTGAGCCGC GTACGTGGATTTGCGCTTGACGAATACATTGGATTGCCATTAGAGCACGAACAATCTTACCACAGCACAATCCGCAGAAC CGTAACCGATTTAATCGGCTTAAACCCAGATTTAGTGCACGTTCCAGGAGATGTTCTTAATGGAGCACCATTAAGCGAAG GTGATAAGATTGCGCACGCTGGAGCAGACTACGACGCTGCTATTGCTGCCGCTGGTGGGATTGACGTGCAGATTCTGGGA ATTGGCTCCGACGGTCACGTTGGATTCAACGAGCCAGGATCTTCTCTTGCATCTGGTACTCGCGTTAAAACACTAACCGA GCAGACTCGCGTAGACAACCGCAGATTCTTCGACGGAGATATTAACCAAGTTCCAACTCACTGCATAACACAAGGAATTG GAACGATTTTGCGCGCTCGTCATCTCGTGCTTCTTGCGTTTGGTGAAAATAAGGCAGATGCGGTAGCTGCAACAGTAGAA GGTGGAGTAAGCTCGCTATGCCCGGCTTCTGCGCTTCAAATGCATCCTCATGCAACAGTGATTATAGATGAGGCTGCTGC AAGCAAACTTAAGCTTGCTGACTACTATCGTTGGGTGTATGCAAATAAGCCATCTTGGCAGGGGATCTGA Protein sequence : MLGVFAESKITKALKEKLKMAEVIIVKDQDEAGELYAESVVDLISRKPDAVLGLATGSSPLKAYEHLAKLVKDKNVDVSR VRGFALDEYIGLPLEHEQSYHSTIRRTVTDLIGLNPDLVHVPGDVLNGAPLSEGDKIAHAGADYDAAIAAAGGIDVQILG IGSDGHVGFNEPGSSLASGTRVKTLTEQTRVDNRRFFDGDINQVPTHCITQGIGTILRARHLVLLAFGENKADAVAATVE GGVSSLCPASALQMHPHATVIIDEAAASKLKLADYYRWVYANKPSWQGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nagB | YP_001800906.1 | glucosamine-6-phosphate isomerase | Not tested | Not named | Protein | 2e-45 | 48 |
