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Name : nrdE (HMPREF0421_21332) Accession : YP_003986437.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : ribonucleotide-diphosphate reductase subunit alpha Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0209 EC number : 1.17.4.1 Position : 1632701 - 1634923 bp Length : 2223 bp Strand : + Note : COG: COG0209; Pfam: PF08343,PF00317,PF02867; InterPro: IPR013346 DNA sequence : ATGAATAGCACGGATCCGATGAGCGAATCTACTTCGCTTAATCTTGATCACACTGACGACACCAACACTGCTAGCAGCAC AGCAGAGCGCATTCGCAACAGCCGCGACTACCACGTTCTTAACGCTATGCTCGGTCTTTTCGACCCAGAAAAAGGTATTC AGTTTGATAAAGATCAGGAAGCAGAAAAGCTTTACGTTTCGGGTTACGTGCAAGAACACAGCATGAAGTTTGCTTCAACT CATGAGCGCTTGAACTATTTGATTAGCAACTACTACTACAACGGAAACGTGTTCGGCAAGTATAGCAGCGAGTTTCTAGA TAAGTTCTACGAGCACGCAGAAGCTGCTCACCACACTTTTGGCACTTTCTTGGGTGCTTTTAAGTTCTACACTTCTTACG CTTTAAAGACTTTCGACGGCAAGCAATATTTGGAAAACTTCGCTCAGCGCGCAGCAGCCGTAGCTTTGGAACTTGCAGAT GGCGATGAAAAAGCAGCGCTCAACTATTTGGACGAGATGCTTGCAGGCCGCTTCCAGCCAGCCACTCCAACGTTCTTGAA TCTTGGTAAAGCTCAGCGCGGAGAGGCTGTGAGCTGCTTCCTCGTGCGTTTGGAAGATAATATGGAGTCTATTGCACGCG GAATTAACTCTGCTTTGCAGCTTTCTAAGCGCGGCGGCGGCGTGGCTCTGCTTCTTACGAATTTGCGCGAGCTTGGTGCT CCTATTAAGCGCATCGAAAATCAGTCGAGTGGCGTTGTGCCTGTTATGAAGCTTTTGGAAGATTCATTCTCTTATGCTAA TCAGCTTGGCGCTCGTCAGGGCGCTGGTGCCGTGTATATTAGCGCTCACCACCCAGATATTATGCGTTTCCTTGACACTA AGCGCGAGAACGCGGACGAGAAGATTCGTATTAAGTCGCTTTCTTTGGGTGTTGTGATTCCAGATATTACTTTTGAGCTT GCTAAGCGTAAGGAAAAGATGGCTTTGTTTAGCCCTTACGACGTTGAGCGCGAGTACGGAAAGCCTTTTGCAGACATCTC CGTTACCGAGCATTACGATGAGATGGTTGCAAATCCTCGCATTCACAAGAAGTACATCGACGCTCGCGAATTCTTTATGA CTCTTGCAGAGATTCAGTTTGAGTCTGGATACCCTTACATTTTGTTTGAAGATACTGTAAATCGCACAAATCCTATTGAA GGCCGCATTACTATGAGCAACTTGTGCTCCGAGATTTTGCAAACTCAAGAGGCAAGCACTTATAACGCCGACTTGTCTTA TAGCCACGTTGGTCGCGATATTTCTTGCAATCTTGGCTCGCTTAATATTGCTAAGGCGATGGACGGTGACTTGGGTACAA GCGTTGATTTGGCTGTGCGCGCGCTCACGTCTGTTTCGGAGCATACTTCGATTGATTCCGTGCCTTCGATTCGTCGCGGA AACGCGGAAGGCCATGCTATTGGCTTGGGTCAAATGAATTTGCACGGTTTCCTTGCTCGCGAGCACATGCAGTACGGAAG CGAGGAAGCTCTTGACTTTACAGACATGTACTTTATGACGGTTGCTTACCACGCTTATAAGGCTTCTCACGCTTTGGCTG TAGAGCGCGGGACTGCTTTTGCAAGCTTTAAGACTAGCGCTTACGCTAAGCCTGCAGGAAAAGGCAACTACTTCGATAAG TACACTGATGGCAGCCGCTCGCTTGAGCCTAAAACTCAAAAGGTTCGCGATTTGTTTGCTCGTTTTAACGTTGCAATTCC AACCGTTTCGGATTGGGAGCAATTGCGCGACGAGATTTTGCGCGATGGCATTTACAACGAGTATTTGCAGGCTGTTCCTC CAACTGGTTCCATATCGTACATAAACCATTCCACGAGTTCAATACACCCGATTGCTTCTCGCATTGAGATTCGCAAAGAG GGCAAAGTTGGCCGCGTCTACTACCCTGCTGCATACATGACGAATGACAATATGCAGTACTTTAAGGATGCTTACGAGAT TGGTTGGAAGGCAATTATTGACACTTACGCGGAGGCAACTCAGCATGTAGATCAGGGATTGTCTCTTACTTTGTTCTTCC CAGACACTACGACTACTCGCGATTTGAACAAAGCTCAGATTTACGCGTGGCGTAAGGGTATTAAGACTCTTTACTACATT CGTATTCGCCAGAAGGCTTTGGAAGGTACAGAAATCGAGGGTTGCGTAAGCTGCACGCTGTAA Protein sequence : MNSTDPMSESTSLNLDHTDDTNTASSTAERIRNSRDYHVLNAMLGLFDPEKGIQFDKDQEAEKLYVSGYVQEHSMKFAST HERLNYLISNYYYNGNVFGKYSSEFLDKFYEHAEAAHHTFGTFLGAFKFYTSYALKTFDGKQYLENFAQRAAAVALELAD GDEKAALNYLDEMLAGRFQPATPTFLNLGKAQRGEAVSCFLVRLEDNMESIARGINSALQLSKRGGGVALLLTNLRELGA PIKRIENQSSGVVPVMKLLEDSFSYANQLGARQGAGAVYISAHHPDIMRFLDTKRENADEKIRIKSLSLGVVIPDITFEL AKRKEKMALFSPYDVEREYGKPFADISVTEHYDEMVANPRIHKKYIDAREFFMTLAEIQFESGYPYILFEDTVNRTNPIE GRITMSNLCSEILQTQEASTYNADLSYSHVGRDISCNLGSLNIAKAMDGDLGTSVDLAVRALTSVSEHTSIDSVPSIRRG NAEGHAIGLGQMNLHGFLAREHMQYGSEEALDFTDMYFMTVAYHAYKASHALAVERGTAFASFKTSAYAKPAGKGNYFDK YTDGSRSLEPKTQKVRDLFARFNVAIPTVSDWEQLRDEILRDGIYNEYLQAVPPTGSISYINHSTSSIHPIASRIEIRKE GKVGRVYYPAAYMTNDNMQYFKDAYEIGWKAIIDTYAEATQHVDQGLSLTLFFPDTTTTRDLNKAQIYAWRKGIKTLYYI RIRQKALEGTEIEGCVSCTL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1481 | YP_001800875.1 | ribonucleotide-diphosphate reductase subunit alpha | Not tested | Not named | Protein | 0.0 | 66 |
