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Name : srtC2 (HMPREF0421_21203) Accession : YP_003986308.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : sortase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3764 EC number : - Position : 1464864 - 1466012 bp Length : 1149 bp Strand : - Note : COG: COG3764; Pfam: PF04203; InterPro: IPR005754 DNA sequence : ATGCTTAGGTTTTTATTCTTAAATCGAAACGTTGCGGTTAAGCATAAGAAACGCGATAAACGAAAGTGGAGATTTTCTAA ATCTTCTATCGTTCCAGCGCTTCTATTAACCGCATCGTTCGCCTCACTGTTATACCCACATGCAGCAATGTGGTTAAGCC AGTATCACATGTCGGAAGTAGCTGCGGAATACGCTAAGCTAATCACGCATGCTATTCCAGCTCCGCATGAGCAGCTGGCT CGCGCGCGCGAATACAATCGCAAGCTATCCGTAGGAGCAATATATGAGGCGAACACGAATATTCCAACATCCCATGGCGA AACGTCTGACGTTAGTCAAAACTATTGGGATCAGTTGAAAGCGAATGACGATGGTCTTATGGCTCGCCTTCGCATTAAGA AAATTGACCTAGATTTGCCCGTGTATCACGGTACGCAGGACGATACTCTGCTTAAGGGACTTGGACATTTGCGCGGAACT TCTCTACCAGTTGGAGGATTAGGGACTCGTTCCGTGATTACTGGCCACCGCGGTTTGGCTAGTGCGGAAATGTTCACGAG ATTGGATGAGATAGATAAGGGCGATTCTTTTACGGTCGAGGTTTTTGACGAGATTCTCACTTACAAGGTGATAGAAAAAA TTGTTGTAAACCCAGACGAAACAAAGAAAATTGCTGCAGTGCCAGGCAAGGATCTTGTGACTCTGATTACTTGCACGCCG CTTGGAATCAACACACAGAGAATCTTGGTGACGGGAGAGCGAGTAATACCGACTCCTGCTGCGGACAAGTCTTTGCTTGG TAAAAAGCCAGATGTTCCGAGATTCCCGTGGTGGCTTGTTGGGAGCATTGCAAGCTTGAGTGTGGTTGGAGGCTACATTT ACTGGGCTGGTCTGCCGATTGTTAAGAAGAAAAAGAAGAAAAACGATAAGCAGAACGGCGATGATCGAAATAATGGTGAT GACCATAGTGATGCCAATGGTGATGACCAGACTAACGATACTCTTTGGCTTGGCATTTATGGCGACCAAAACAAGCAGAT GTATAGGGATTCCGAAGAAGTGAGAAGGATTAGTCAGGAATCCTTTGAGTCGATTATTGATGGTTTTGCGCAGGGCAAGC GTCCGAAGGCTTCAAAGCTTAAAAACTGA Protein sequence : MLRFLFLNRNVAVKHKKRDKRKWRFSKSSIVPALLLTASFASLLYPHAAMWLSQYHMSEVAAEYAKLITHAIPAPHEQLA RAREYNRKLSVGAIYEANTNIPTSHGETSDVSQNYWDQLKANDDGLMARLRIKKIDLDLPVYHGTQDDTLLKGLGHLRGT SLPVGGLGTRSVITGHRGLASAEMFTRLDEIDKGDSFTVEVFDEILTYKVIEKIVVNPDETKKIAAVPGKDLVTLITCTP LGINTQRILVTGERVIPTPAADKSLLGKKPDVPRFPWWLVGSIASLSVVGGYIYWAGLPIVKKKKKKNDKQNGDDRNNGD DHSDANGDDQTNDTLWLGIYGDQNKQMYRDSEEVRRISQESFESIIDGFAQGKRPKASKLKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| srtH | YP_005126713.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 4e-60 | 47 |
| srtH | YP_005139151.1 | putative fimbrial associated sortase-like protein | Not tested | Not named | Protein | 1e-51 | 46 |
