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Name : dppA (HMPREF0421_21083) Accession : YP_003986188.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Unknown Product : dipeptide ABC transporter binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4166 EC number : - Position : 1300135 - 1301766 bp Length : 1632 bp Strand : - Note : COG: COG4166; Pfam: PF00496; InterPro: IPR000914 DNA sequence : ATGAAGAATAAGGCATTACTTTTTGCCGCAGCTGCGTGCTCGATTGCTATGCTGCTCGGTGGATGCGGTTCTTCTGCTTC GAAGACCGCTCAAACAAATGGTGGCAAGGTTGTTATTACTGTAAACAACTCCGAGCCTCAGAACGAGCTTGTTCCGGGAA ACATTAACGAAAATGCTGGTGGTCGTCCTGCTCTATTGGTCAACTCCATGTTGGTCACTTTTGATGAAAAGGGCAACACG GTAAATGAAGATGCCGAGAGCGTAACTCCAAACGCCGATGCAACCCAATACACTGTTAAGCTTAAAAAAGATAAGAAGTT CAGCGATGGCACTCCAATCACCGCAGAAAGCTTTACTAAGGCTTGGAGCTTTGTATCAAACGCTAAGAATGCTCAGAAGT GCTCTTCCTTCTTCCAAACCATTAAGGGCTACGAAGACTTGCAGAAGAATGATACTAAGGGCGACGAGCAGCTTTCTGGC TTAAAGGTTGTAGATAAGTACACCTTTACTGTTGATTTGAACCAGCCAGATTCTGTGTTTGCTATTAAGGTTGGTTACCT TGCATTCGCTCCTCTTCCAGAATCCTTCTACAAGAATCCAAAGGCTTATGGCGAAAAACCAGTTTCTTCTGGACCATACT TGTTTAAGTCTTGGGATCACAACAAGCAGATCGAACTTGTAAAGAACCCAGATTACGATGGCCCACGCAAGGCTAAGAAT GACGGCATTACCTTTAAGATCTACACCGACGGCACCGCTGCTTACCGCGATGTTCAGTCTGGCAATCTTGATATGACCGA TAACATTCCAGATACCGAAACCAAGACTTTCCAAAAGGACACCACTGTGAAGGCATACAACCGTCCAGGTTCTGTAATCC AGCAGTTCGGTATTCCTGCAAAATTGCCACATTTCGATGTAACTACCGAAGAAGGCCGCTTGCGTCGTCAAGCTGTTTCT ATGGCAATCGACCGCGAAACCATCATCAAGAAGGTTCTTAACAACACTGCATCTCCTGCAAACGAGTTCACTTCTCCTTT GACTCCAGGCTACAAGGCAGATCTTAAGGGTCACGAAAATCTTAAGTTTAATGCCGCAAAGGCTAAGGAACTTTGGGCAA AGGCAGACAAGATCTCTAAGTATGATGGTCCTCTTACCTTTACTTACAACGCCGATGGCAACGCTAAGTCTGTGTTCGAC GCAGTTGTAAACTCCCTCAAGAATCATCTTGGAATTAATGCTGAAACCACTCCAGTTCCAACATTCCAAGAGTTCCGTAA CGCATGCGAACAGCGTCAGATTAAAGGTGCATGGCGTGCAGGCTGGATGCCAGATTACCCAAGCCCAGAAAACTACTTGA CTCAGGAATTTGCTTCCGTTGCTGCAGATGGCAATGGTTCTAACGAAGCTGATTACAAGAATCCTAAGTTCGATGCTTTG CTTAAGAAGGCTTCTTCTTCTAAGCAAGCTGAGGCAACTAAGCTTTATCAGCAAGCTAACGAGATTCTTCTTGAGGATCT TCCATACGTACCACTGTTCTACTCGAACGCTAAGGCTGTTATGGTTCCAAGCTTGAAGGGCTTTGTAATGGATTGGCAGA ATATGCCACTTTACTACAAGCTCCACAAGTAA Protein sequence : MKNKALLFAAAACSIAMLLGGCGSSASKTAQTNGGKVVITVNNSEPQNELVPGNINENAGGRPALLVNSMLVTFDEKGNT VNEDAESVTPNADATQYTVKLKKDKKFSDGTPITAESFTKAWSFVSNAKNAQKCSSFFQTIKGYEDLQKNDTKGDEQLSG LKVVDKYTFTVDLNQPDSVFAIKVGYLAFAPLPESFYKNPKAYGEKPVSSGPYLFKSWDHNKQIELVKNPDYDGPRKAKN DGITFKIYTDGTAAYRDVQSGNLDMTDNIPDTETKTFQKDTTVKAYNRPGSVIQQFGIPAKLPHFDVTTEEGRLRRQAVS MAIDRETIIKKVLNNTASPANEFTSPLTPGYKADLKGHENLKFNAAKAKELWAKADKISKYDGPLTFTYNADGNAKSVFD AVVNSLKNHLGINAETTPVPTFQEFRNACEQRQIKGAWRAGWMPDYPSPENYLTQEFASVAADGNGSNEADYKNPKFDAL LKKASSSKQAEATKLYQQANEILLEDLPYVPLFYSNAKAVMVPSLKGFVMDWQNMPLYYKLHK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CDBH8_0922 | YP_005160014.1 | putative peptide transport system secreted protein | Not tested | Not named | Protein | 1e-103 | 45 |
