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Name : HMPREF0421_21068 (HMPREF0421_21068) Accession : YP_003986173.1 Strain : Gardnerella vaginalis ATCC 14019 Genome accession: NC_014644 Putative virulence/resistance : Resistance Product : cadmium resistance family protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4300 EC number : - Position : 1285601 - 1286212 bp Length : 612 bp Strand : - Note : COG: COG4300; Pfam: PF03596; InterPro: IPR004676 DNA sequence : ATGGAAACAATAGTATCCGCTTTATTAGTTTTTGTTTCTACATCCATTGACTACTTAGTTGTTTTGACTATTTTATTCGC TAGTCAAGGAAAGAAAGGTTTGAAATCAATTTATGTAGGGCAGTATTTAGGTACAGGACTGCTTGTACTGGCTAGTCTTA TTGCCGCTTACTTTTTAAATTTTATTCCACAAGATTGGATTATCGGACTCCTTGGTCTAATTCCGCTAGGTCTTGGTATA AGAGCAATTTTTGTGGATGAAGATATTGATGAAGAAGATATCGAGGGGAAAATTACCGGAGATGGATCAAAAATCTTAGC ATTTACAAGTTTAACAGTGGCAATGGGTGGAGATAATTTAGGAATTTATATCCCCTATTTTACAGGAAAGAGTTTGATTG AGATTAGTATAAGTTTAGTAATATTTGCCTTAGGGATTTTGATTCTATGCAAATTATCTCAAAATCTCGCCTCAATTTCT GCTATCGGAGAGACTGTGGAAAAGTACGAAAAAGTAATTGTACCTGTCGTGTTTATTGGACTCGGTCTTTATATATTGAT TGAAAATGGAACTATTAATTATTTCATAGGTCAAGTCCTAAAAGTGGTGTAA Protein sequence : METIVSALLVFVSTSIDYLVVLTILFASQGKKGLKSIYVGQYLGTGLLVLASLIAAYFLNFIPQDWIIGLLGLIPLGLGI RAIFVDEDIDEEDIEGKITGDGSKILAFTSLTVAMGGDNLGIYIPYFTGKSLIEISISLVIFALGILILCKLSQNLASIS AIGETVEKYEKVIVPVVFIGLGLYILIENGTINYFIGQVLKVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAB47611.1 | DS RF | Not tested | Type-III SCCmec | Protein | 1e-22 | 45 |
| unnamed | BAC57486.1 | hypothetical protein DSRF | Not tested | Type-IIIinv SCCmec | Protein | 1e-22 | 45 |
| cadD | YP_252014.1 | cadmium binding protein CadD | Not tested | SCCmec | Protein | 7e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HMPREF0421_21068 | YP_003986173.1 | cadmium resistance family protein | BAC0057 | Protein | 4e-22 | 41 |
