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Name : serS (HMPREF0733_10754) Accession : YP_003983646.1 Strain : Rothia dentocariosa ATCC 17931 Genome accession: NC_014643 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 808489 - 809793 bp Length : 1305 bp Strand : - Note : COG: COG0172; Pfam: PF02403,PF00587; InterPro: IPR002317 DNA sequence : GTGATTGATATTAACCTCCTCCGCGAAAACCCCGAGATTTTCCGCGCCTCCCAGCGAGCACGCGGCAAAGACGAAGCCCA CGTAGACCGTATTCTTGAGGCGGATGCCGCACGCCGCGCCTCGATCGGCACCTACGAGAACCTGCGCGCCGAACAGAACG CCTTCGGTAAACAGGTGGCGAAGGCACCCAAGGAAGAGAAACCCGCTCTCGTAGCGCAGGCGAAAGAACTCGCCGCCCAC GTGGCAAATGCGAAAGCGGCATCTGAGGCGAAAACCGCCGAATATGAAGAGCTGCTAAGCTCCATCGAAAACCTGATTAT CGACGGCGTACCCACCGGCGGCGAAGACGACTTTGTGGTGCTCAAAGAAGTCGGCACCCCCCGCGATTTCGCCGCAGAAG GTTTTGAACCGCGCGACCACCTGGAAATAGGCGAACTCATCGGCGGCATCGATATGGCACGTGGCGCCAAGGTCTCCGGC TCGCGCTTTTACTTCCTCAAAGGGCAGGTTGCCCGCCTGGAGCAGGCGCTCATGTGGATGGCGCTCGATCTGGCAACAGC CAACGGCTTCACCATGATGACAACCCCCACCCTCGTGCGCCCCGAAATTATGAACGGAACCGGGTTCAACGTCAAGCACG ACGACGAAATATACCGCCTCGAACGTGATGACCTGTACCTGGTCGGCACCTCGGAGGTGGCGCTTGCGGGCTACCATATG GACGAAATACTCGACCTTAGCGACGGACCCAAAAAATACCTGGGATGGTCATCCTGCTATCGCCGCGAAGCCGGTGCCGC AGGTAAAGACACCCGCGGTATCATTCGCGTGCACCAGTTCAACAAGGCCGAAATGTTCGTCTACTGCCAGGTGGAACAGG CGGAAGAAATACACGAGCAGATGCGCGCCCTCGAAGAAGAAATGCTGCAAAAATGCGGCCTTGCGTATCGCGTGATTGAT ACCGCCGCAGGGGACCTGGGCACCTCTGCCGCACGCAAATTCGACTGTGAGGCATGGGTTCCCACCCAGGGCACCTACCG CGAGCTGACCTCGACCTCGAACTGCACCACCTACCAGGCACGCCGCCTGAACATACGCGAACGCACCGCAGACACCGTGG ACGATGTGGGCAATGTACGCAAGGGCCGCACCCGCGCGGTCGCAACCCTCAACGGCACCTTGGCGACTACCCGTTGGGTT GTGGCGATTCTGGAGACACACCAGCAGCCCGACGGTTCGGTGCGTATCCCTGAAGCACTGCGCCCGTATATGGGCGGTGC TGAGGTTATTCCGGTCGCGTCGTAG Protein sequence : MIDINLLRENPEIFRASQRARGKDEAHVDRILEADAARRASIGTYENLRAEQNAFGKQVAKAPKEEKPALVAQAKELAAH VANAKAASEAKTAEYEELLSSIENLIIDGVPTGGEDDFVVLKEVGTPRDFAAEGFEPRDHLEIGELIGGIDMARGAKVSG SRFYFLKGQVARLEQALMWMALDLATANGFTMMTTPTLVRPEIMNGTGFNVKHDDEIYRLERDDLYLVGTSEVALAGYHM DEILDLSDGPKKYLGWSSCYRREAGAAGKDTRGIIRVHQFNKAEMFVYCQVEQAEEIHEQMRALEEEMLQKCGLAYRVID TAAGDLGTSAARKFDCEAWVPTQGTYRELTSTSNCTTYQARRLNIRERTADTVDDVGNVRKGRTRAVATLNGTLATTRWV VAILETHQQPDGSVRIPEALRPYMGGAEVIPVAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-60 | 42 |
