Gene Information

Name : HMPREF0733_10735 (HMPREF0733_10735)
Accession : YP_003983627.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : 3.6.3.-
Position : 792801 - 793577 bp
Length : 777 bp
Strand : -
Note : COG: COG1121; Pfam: PF00005; InterPro: IPR003593

DNA sequence : 
ATGGAAACACTGCTGAGAGTCGAAAACTTGGGCGTCCATTATGGAACCGTGCGCGCCCTGTATGAGACTACTTTCGAGCT
TGGTACCGGGAGTATCTGCGGGCTGATCGGCATGAACGGTTCGGGAAAATCGACCCTCTTCAAAGCCATTATGGGTGTTA
TTCCCGCGCATACCGGAACCGTGGAGATCGCGGGCAAAGAACCATACCTTGCGCGTAAAAACGGCATTGTCAGTTATGTG
CCGCAGAGCGAGGAAATAGATTGGAGCTTTCCCGTCTCGGTGCGTGAGGTCGTGGCGATGGGGCGGTACCGCGGGCTGGG
CATCACCCGTCGGCTGCGTGCCACCGATAAGCAGGCGGTCGAGCACGCCCTAGAGCGCGTGGAGCTGACCGAGCTTGCGC
ATCGTCAAATCGGGGCACTTTCGGGCGGACAGCGCAAGCGGGCATTCGTGGCGCGGGCGATAGCGCAGGGTGCACGGCTT
CTATTACTTGATGAGCCCTTCGCCGGAGTGGATAAAAGGTCAGAATCCATGCTCATTCAGGTGTTGAAGCAGATGCGCAG
CGAGGGTTCCACCGTTCTGGTTTCAACCCATGATTTGGCATCCTTACGCGCTTTTGCCGACGATGCGCTGTTGCTACGTC
AAACGATTTTGATGCACGACACCCCGCAGGCGGTGTTAGCCCCTGAAAATTTGGTGCAGGCGTTCGGCATGCAGGTTCAG
GCGGGCGCCGATAGCGGCGCATCCGACGAGCAGACCCGGCGTGAGAAGGGAGAATAG

Protein sequence : 
METLLRVENLGVHYGTVRALYETTFELGTGSICGLIGMNGSGKSTLFKAIMGVIPAHTGTVEIAGKEPYLARKNGIVSYV
PQSEEIDWSFPVSVREVVAMGRYRGLGITRRLRATDKQAVEHALERVELTELAHRQIGALSGGQRKRAFVARAIAQGARL
LLLDEPFAGVDKRSESMLIQVLKQMRSEGSTVLVSTHDLASLRAFADDALLLRQTILMHDTPQAVLAPENLVQAFGMQVQ
AGADSGASDEQTRREKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-45 48
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 9e-46 48
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 7e-46 48
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 5e-45 47
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 5e-45 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0733_10735 YP_003983627.1 ABC transporter ATP-binding protein BAC0350 Protein 4e-46 48
HMPREF0733_10735 YP_003983627.1 ABC transporter ATP-binding protein BAC0440 Protein 6e-50 48
HMPREF0733_10735 YP_003983627.1 ABC transporter ATP-binding protein BAC0400 Protein 6e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0733_10735 YP_003983627.1 ABC transporter ATP-binding protein VFG0526 Protein 4e-46 48