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Name : lysS (HMPREF0733_10706) Accession : YP_003983598.1 Strain : Rothia dentocariosa ATCC 17931 Genome accession: NC_014643 Putative virulence/resistance : Unknown Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 764245 - 765828 bp Length : 1584 bp Strand : - Note : COG: COG1190; Pfam: PF01336,PF00152; InterPro: IPR002313 DNA sequence : TTGAGCAACGAGCAGAGCGCCACACCGGCCATTGCAGATATGTCCGAGCAGATGAAGATTCGCTTGGAGAAGCGCGCTAA GTTCCTGGAGACCGCGGGTGAAGCGTATCCCGTTGGGCTTCTGGATGCCGAAGGTAAGCGCATCGAACCGGATCATATCG CCGATATTCGCGCTCAATACGACCCGAAATTAGAGTCCGGCGAGCTCACCGCCGGGGATGAAACCGACCATGTGGTGCAT GTGCCGGGCCGTGTTGTGTTCGTGCGCAATACCGGTAAACTCTGCTTTGCATCCCTGCAAGCGGGTACGAATGGCGACCG CATTCAGGCGATGCTCTCGCTCAATGAGGTTGGTGAACAGTCGCTTGCCGACTGGAAATCCCTGGTGGATTTGGGCGATC ACGTGTATGTGACCGGCCGCGTGGTGGTCTCTCGCCGCGGCGAACTGTCGATTATGGTGCGTGAGTGGAGGATGGCCGCG AAGTCGATTCGCCCCATGCCTGTGCTGCACAAGGATTTGAACGAGGAAACTCGGGTGCGCCGTCGCTACCTGGACTTGAT GGTTCGCCCTGAGGCGCGTGACCTGGTGAAAAAGCGCGCTCTGATTACCCGCACTGTGCGCCGCGTGCTGGAAGATCACG GCTATATTGAGCTGGAAACCCCGGTGCTGCAGCTGGTGCACGGCGGCGCGACGGCTCGCCCGTTCCGCACTCATCTGAAT GCCTTCGACCAGCCTATGACGATGCGCATCGCCACCGAACTTCCGCTTAAGCGTGCCGTGGTGGGCGGCATTGAGCGCGT CTACGAAATTGGTCGCGTATTCCGCAACGAGGGCGTGGATTCGACGCACAGCCCCGAATTTACAACCCTGGAATGCTACG AAGCCTACGCCGATCAGTATGTGATGGCCGAGCGCATGCAGGAGATTATTGTTGCGTGCGCACAGGAGCTCGGGGTTACC GCGATTGAGACTGAGGACGGCACGATCGACCTGGGCGGTGAGTGGGCGTGGCTGAGCGTCTACCCCGGACTGTCTGAGGC CGTGGGCGTTGAAATAACCCCGGACACCCCCGCTGAGACGCTGCGCGAGATCGCTGCCAAGCATGAGGTTGAGGTGGATC CCGCCTGGGATGCTGAGAAACTTGTGATTGAGCTTTTCGGCGAAATCGTGGAGCCAACTCTGCTGAACCCGACCTTTGTA TATAACTACCCGCCAAGCGCCCAGCCTCTGGCGCGGCCAAACCGCGATGGTTCCCGCACGATTGAGGCGTGGGATCTGAT TATTGGCGGTATGGAGCGCGGTACCGCGTTCTCTGAGCTGATCGACCCTGTGATTCAGCGCGAGCGTTTGACTGAGCAGT CCCATAAGGCCGCTGCGGGCGATGACGAGGCGATGGAACTTGATGAGGACTTCTTACGCGCCCTAGAGCACGGTGCACCG CCGATGGGCGGTCTCGGGCTGGGCGTTGACCGTCTGATTATGCTTTTGGCGGGTGAACAGGACCCTGAACGCCCTGGAAC CGTGGTGCGTCAGCCAGGTATTCGTGAAACTATTTTGTTCCCGCTGATGAAACCGGAGTCGTAA Protein sequence : MSNEQSATPAIADMSEQMKIRLEKRAKFLETAGEAYPVGLLDAEGKRIEPDHIADIRAQYDPKLESGELTAGDETDHVVH VPGRVVFVRNTGKLCFASLQAGTNGDRIQAMLSLNEVGEQSLADWKSLVDLGDHVYVTGRVVVSRRGELSIMVREWRMAA KSIRPMPVLHKDLNEETRVRRRYLDLMVRPEARDLVKKRALITRTVRRVLEDHGYIELETPVLQLVHGGATARPFRTHLN AFDQPMTMRIATELPLKRAVVGGIERVYEIGRVFRNEGVDSTHSPEFTTLECYEAYADQYVMAERMQEIIVACAQELGVT AIETEDGTIDLGGEWAWLSVYPGLSEAVGVEITPDTPAETLREIAAKHEVEVDPAWDAEKLVIELFGEIVEPTLLNPTFV YNYPPSAQPLARPNRDGSRTIEAWDLIIGGMERGTAFSELIDPVIQRERLTEQSHKAAAGDDEAMELDEDFLRALEHGAP PMGGLGLGVDRLIMLLAGEQDPERPGTVVRQPGIRETILFPLMKPES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 6e-103 | 48 |
