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Name : clpB (HMPREF0733_10529) Accession : YP_003983421.1 Strain : Rothia dentocariosa ATCC 17931 Genome accession: NC_014643 Putative virulence/resistance : Virulence Product : chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 583531 - 586128 bp Length : 2598 bp Strand : - Note : COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003959 DNA sequence : ATGGACGCAAAATTCACAACCAAGAGCCAAGAAGCGCTCTCCGCCGCTAATATGAACGCGCAGACAGCGGGTAATCCCAG CATCGAACCTGCGCACATCCTCAAAGCACTGATGGATCAACGAGAAGGCGTTGCCGTAGCGGTTCTCAAGGCCGCAGGAC TCGACATTGATGCCATTTCGGAAGCCGCATCCGCAGAGATTAAGAAGCTGCCGAAGGCATCTGGCGCATCGGTGCAGAAC GCAAACTTCAGCCGCAGCGCCCTTGCCGCTATTCAGAGTGCGCAGACCCACGCTCAGAAATTCGGCGACACCTACATCTC CACCGAAATGCTGCTGCTGGGTATCGCAAGCGGCGATAGCGATACCGCTCGCGCACTTGAAAACCTGGGCGCAACTGCCA AAGTTATCGAAGAGACCATTCCCCAAGTACGAGGAGACCGCACCGTGGATACCCCGGACCCCGAAGGCACCTTCCAGGCC CTTGAAAAGTACGGTACCGACCTGACCGCGCTCGCCCGCGAAGGCAAGCTCGACCCCGTGATCGGCCGAGACTCCGAAAT CCGCCGCGTGGTGCAGGTGCTCTCACGGCGCACCAAGAACAACCCCGTGCTCATTGGTGAACCCGGCGTCGGTAAAACCG CCGTGGTCGAAGGGTTGGCTCAGCGCATGGTCTCTGGCGACGTCCCCGAATCCCTGCGCGGTAAAACCCTGATCAGCCTT GACCTTGGGTCCATGGTTGCGGGCGCTAAATACCGCGGCGAATTCGAGGAACGCCTCAAGGCCGTGCTCGAAGAAATTAA GAAATCCGAAGGTCAGATCGTCACCTTTATCGATGAGATGCATACCGTGGTTGGTGCGGGTGCATCCGAAGGTTCCATGG ATGCGGGCAATATGCTCAAGCCCATGCTGGCGCGCGGCGAGCTGCGCATGATTGGCGCTACCACGCTCGACGAGTTCCGC GAGAACATTGAGAAAGACCCCGCTCTGGAACGTCGTTTCCAGCAGGTGTACGTGGGTGAGCCTAGTGTTGATGACACCAT CGGTATTCTGCGTGGGCTCAAGGAACGCTACGAGGCGCACCATAAGGTGCAAATCTCAGATGCCGCTCTAGTCGCCGCCG CAGCTCTTTCAAATAGGTACATTCCCTCACGTCAGCTGCCCGATAAGGCGATCGACCTGGTGGATGAGGCCGCATCGCGC CTGCGCATGGAGATCGACTCGGCTCCCGAGGAAATCGACCAGCTGCGCCGCGCCGTAGACCGTCTGACTATGGAAGAACT GGCCCTCAAGAACGAGACCGACCCGGCGTCGAAGGAACGCTTGGCGGCGCTGCGCAAAGACATGGCTGATAAGAAAGAAC AGCTGGATGCGCTCAACGCCCGCTGGGAAGCCGAAAAGGCCGGTCTGAACCGCGTGGGCGATCTCAAGAGCGAAATCGAC GAGCTGCGCTCGCGTGCCGAGGTAGCACAGCGTGAGGGTAACCTGGCGGATGCATCCCGCCTGCTCTACGGCGAAATTCC CGCCAAGGAGAAGGAACTGGAAGAAGCTCAGCGCGCCGAAACTGAGGCTCATGGCGAGGCTATGGTCTCTGAAGAGGTCA CGGCTGACGACATTGCCGAGGTTATCTCTTCCTGGACGGGCATTCCCGCCGGGCGCATGCTTCAGGGCGAATCCGAGAAG CTGCTGGAGATGGAGAAGCGCATCGGTGAACGCCTGATCGGTCAGGAAGCCGCCGTGGTTGCTGTGGCGGATGCGGTTCG CCGCGCCCGCGCCGGAATTTCCGACCCGAACCGCCCGATTGGTTCCTTCCTGTTCCTGGGACCGACCGGTGTGGGTAAGA CCGAACTTGCGAAGGCTCTGGCGGAGTTCCAGTTTGACGACGAGCACGCCCTAGTGCGCATCGACATGAGTGAGTACGGC GAGAAGCACAGCGTTTCCCGCCTGGTGGGTGCGCCTCCCGGATATGTGGGGCATGAAGAAGGCGGTCAGCTGACCGAGGC TGTGCGCCGTCGCCCCTACTCCGTGGTGCTGCTGGACGAGGTTGAGAAGGCCCACCCCGAGGTCTTCGATATTCTGCTGC AGGTGCTCGATGACGGTCGTCTGACCGACGGTCAGGGCCGCACCGTGGACTTCCGCAACGTGATTCTGATTCTGACCTCG AACCTGGGTTCCCAGTATCTGGTCGATCAGGAGATGCCGTTTGAGGAGCGTACCGAGAAGGCGATGCAGGTGGTTCACCA GGCGTTCCGTCCCGAGTTCCTGAACCGTCTGGATGACATCATCATGTTTGAGCCGCTCTCTTCCGAGCATCTGGGGCAGA TTGTGAACCTGCAGATTCAGGGCATGGGCAAGCGTCTGACCGACCGCCGCCTGACCCTGGATGTTACCCCCGCCGCCCTG GAGTGGCTGGGCTTGGCAGGGTACGATCCGGCCTTCGGTGCCCGCCCGCTGCGCCGCCTGGTACAGCGCGAGATCGGCGA CCGTCTGGCGAAGGGCATCCTCTCGGGCGCTATCCACGATGGCGACACCGTAGAGGTGGATGTGAACCCGGATGTTGCAA TGGACGGTCTGTCAGTGACCTCCAAGCGTGACGACTAA Protein sequence : MDAKFTTKSQEALSAANMNAQTAGNPSIEPAHILKALMDQREGVAVAVLKAAGLDIDAISEAASAEIKKLPKASGASVQN ANFSRSALAAIQSAQTHAQKFGDTYISTEMLLLGIASGDSDTARALENLGATAKVIEETIPQVRGDRTVDTPDPEGTFQA LEKYGTDLTALAREGKLDPVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRMVSGDVPESLRGKTLISL DLGSMVAGAKYRGEFEERLKAVLEEIKKSEGQIVTFIDEMHTVVGAGASEGSMDAGNMLKPMLARGELRMIGATTLDEFR ENIEKDPALERRFQQVYVGEPSVDDTIGILRGLKERYEAHHKVQISDAALVAAAALSNRYIPSRQLPDKAIDLVDEAASR LRMEIDSAPEEIDQLRRAVDRLTMEELALKNETDPASKERLAALRKDMADKKEQLDALNARWEAEKAGLNRVGDLKSEID ELRSRAEVAQREGNLADASRLLYGEIPAKEKELEEAQRAETEAHGEAMVSEEVTADDIAEVISSWTGIPAGRMLQGESEK LLEMEKRIGERLIGQEAAVVAVADAVRRARAGISDPNRPIGSFLFLGPTGVGKTELAKALAEFQFDDEHALVRIDMSEYG EKHSVSRLVGAPPGYVGHEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDILLQVLDDGRLTDGQGRTVDFRNVILILTS NLGSQYLVDQEMPFEERTEKAMQVVHQAFRPEFLNRLDDIIMFEPLSSEHLGQIVNLQIQGMGKRLTDRRLTLDVTPAAL EWLGLAGYDPAFGARPLRRLVQREIGDRLAKGILSGAIHDGDTVEVDVNPDVAMDGLSVTSKRDD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 1e-106 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_003983421.1 | chaperone protein ClpB | VFG2076 | Protein | 3e-116 | 45 |
| clpB | YP_003983421.1 | chaperone protein ClpB | VFG2084 | Protein | 3e-112 | 44 |
