Gene Information

Name : HMPREF0733_12192 (HMPREF0733_12192)
Accession : YP_003985083.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : 3.6.3.-
Position : 2470622 - 2471383 bp
Length : 762 bp
Strand : +
Note : COG: COG1136; Pfam: PF00005; InterPro: IPR003593

DNA sequence : 
ATGACTACTACATTAGATACTTCTGTTAAACCAGCTGTTACCGCCCAAAACCTGAGCAAGACTTACGGCACAGGTGAGGC
GACGGTACATGCCCTCAATAACGTAACAGTTTCTTTCGAACAGGGTAAATTTACCGCTATTATGGGGCCTTCCGGCTCCG
GTAAATCTACCCTTATGCAGACTTTGGCAACCCTAGATACTCCGGATGTTAACCCCAAAACCAGCATCAAAATTGCCGAT
ACCGAGCTATACGGTCGGCGGGATAAAGAGTTAACCGAGTTTCGTCGCGAACATATCGGCTTTATTTTCCAGGCCTTCAA
CCTGGTACCCACCCTCACCGCCGGGCAGAATATCGACTTACCGCTTGGCCTGGCAGGCAAAAAGCCTGATCCTATTTGGC
GCGATTATCTTGTGGAGACTTTGGGTCTAACAAAACGGCTCAGCCACCGTCCCGAACAGCTCTCCGGTGGTCAGCAACAA
CGCGTCGCCATCGTACGCGCACTACTCTCCCGCCCGGACGTCGTCTTCGCCGACGAGCCCACCGGTAACCTCGATTCAAA
CTCTGGTACCGAAGTACTCAAGCTCCTGCGAACCGCGGCAAACGAACATCAGCAAACCATCCTCATGGTGACCCACGATG
CACACGCAGCATCCTACGCAGACCGCGTGGTCTTCCTCAAAGACGGTGCCATAGCTGGCGAAATGCTCAAACCCACCCAC
GATGCTGTTCTAAACGCCATGGGACAGTTGGAAGGTGAATAA

Protein sequence : 
MTTTLDTSVKPAVTAQNLSKTYGTGEATVHALNNVTVSFEQGKFTAIMGPSGSGKSTLMQTLATLDTPDVNPKTSIKIAD
TELYGRRDKELTEFRREHIGFIFQAFNLVPTLTAGQNIDLPLGLAGKKPDPIWRDYLVETLGLTKRLSHRPEQLSGGQQQ
RVAIVRALLSRPDVVFADEPTGNLDSNSGTEVLKLLRTAANEHQQTILMVTHDAHAASYADRVVFLKDGAIAGEMLKPTH
DAVLNAMGQLEGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-38 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-38 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF0733_12192 YP_003985083.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-45 48
HMPREF0733_12192 YP_003985083.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-45 44
HMPREF0733_12192 YP_003985083.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-33 43
HMPREF0733_12192 YP_003985083.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-41 42