Gene Information

Name : nrdE (HMPREF0733_12052)
Accession : YP_003984943.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Unknown
Product : ribonucleotide-diphosphate reductase subunit alpha
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0209
EC number : 1.17.4.1
Position : 2298938 - 2301118 bp
Length : 2181 bp
Strand : -
Note : COG: COG0209; Pfam: PF08343,PF00317,PF02867; InterPro: IPR013346

DNA sequence :
TTGGACGCAAAACTGCCTTCAGCGCTAGAGACTCTCGGTGCCGGACACAGCTCCAAAGCGGTACCTGACAAATTCAAAGG
TATGAGTTACCACGAGCTGAACGCTTTGCTGAATCTCTACGATGAAAACGGCATGATCCAATTTGACGCCGACCGTCAAG
CCGCACGTCAGTATTTTCTTCAGCATGTTAATAACAACACGGTTTTCTTCCACGATCTCGAAGAAAAAATCGAGTACCTG
ATTGAGAATCAGTACTACGAGCCGGAACTCTTCGACCGGTACAGTTTTGACTTTGTGAAGTCTCTTTTCAAACGTGCCTA
TGCGGCCAAGTTCCGTTTTCCCACCTTCCTAGGCGCCTTCAAGTTCTACACTTCCTACGCGCTCAAGACCTTCGACGGTC
AGCGTTACCTGGAGCGTTTCGAGGATCGTGTATGCATGGTGGCTCTGCTTCTTGCTGAAGGCAATGGAAAACTTGCAGAA
GAGATCGTAGATGAGATCATTTCCGGTCGTTTTCAGCCCGCAACCCCGACCTTCCTGAACGCTGGTAAGAGGCAGCGCGG
TGAGCTCGTTTCCTGCTTCCTGCTGCGTATTGAGGACAATATGGAGTCGATTGGCCGTTCCATCAACTCTGCCCTGCAGC
TTTCAAAACGTGGAGGCGGTGTCGCGTTCGCCCTCACGAACCTACGTGAGTCTGGGGCTCCCATCAAGAAGATTGAGAAC
CAATCATCCGGTGTTATCCCTGTGATGAAGCTCCTTGAGGATGCATTCTCATATGCAAATCAGTTGGGGGCTCGTCAGGG
TGCAGGCGCGGTTTACCTGCACGCGCATCACCCCGATATTTATGCTTTCTTAGATACTAAGCGTGAAAACGCAGACGAGA
AGGTGCGCATTAAGACCCTGTCTTTGGGCGTTGTGATTCCTGATATTACCTTCGAGCTGGCAAAGCGTAACGAAGATATG
TATCTGTTCTCGCCCTACGATGTAGAACGTATCTACGGAGTAGCTTTCTCAGATATCAACGTTTCTGAGAAGTACTACGA
AATGGTGGATGACTCGCGGATTCGCAAGACCAAGATCAACGCGCGCGAGTTCTTCCAGACCATTGCTGAGGTGCAGTTCG
AGTCCGGGTATCCCTACGTGATGTTTGAGGATACGGTTAACCGGTCTAACCCGATTGAAGGCAAGATCATCATGTCTAAC
CTTTGCTCGGAGATTCTGCAGGTTTCAAAGCCGTCGATTTACCACGACGATTTGAGCTACGCCGAAATTGGGAAAGATAT
TTCGTGCAACCTTGGGTCTCTCAACATCGCAATGACCATGGACGGTGACGACCTAGGGAAAACCGTTGAAACCGCTATTC
GTTCGCTTACCGCAGTTTCCGACCAATCCGATATTCGTTCCGTGCCGTCTATCGAACGCGGTAACGATATGAGCCACGCG
GTCGGTCTGGGGCAGATGAACCTGCACGGGTACCTGGCGCGTGAGCACGTTTACTACGGTTCCGAAGAAGGTCTGGACTT
CACCAATATTTACTTCTACACGGTGACGTACCATGCTATTCGCGCTTCCATGGAGATCGCCAAGGAGCGCGGCGTGACCT
TTGAAGGGTTTGAGAGTTCAAAGTACGCTAACGGTGAGTTCTTCGCCAAGTACATTGAGAAGGAATGGGAACCGCAGACC
GAACGGGTACGTGAGCTGTTTGCTAAGCATCATATTCCGACCCGCGAAGACTGGATTCAGCTTGCCGCCGATGTAGCCCA
ATACGGCATGTACAACCAGAACTTGCAGGCCGTTCCGCCCACCGGATCTATCTCGTACATCAACGGTTCGACTTCTTCGA
TCCACCCGATTGCTTCTAAGATTGAGATTCGTAAGGAAGGCAAGCTGGGGCGAGTCTACTACCCGGCACCGTTCATGACG
AACGATAACCTGGAATACTTCCAAGACTCCTACGAAATTGGGTACGAGAAAATCATAGATACCTATGCCGTGGCAACTCA
GCACGTGGATCAAGGTCTGTCTTTGACTCTCTTCTTCCGGGATACTGCGACCACTCGCGATATTAACCGTGCCCAGATTT
ACGCATGGCGTAAGGGTATCAAGACTATTTACTACATTCGTCTGCGTCAGATGGCTCTTGAAGGCACCGAAGTTGAGGGC
TGCGTATCCTGCATGCTGTAA

Protein sequence :
MDAKLPSALETLGAGHSSKAVPDKFKGMSYHELNALLNLYDENGMIQFDADRQAARQYFLQHVNNNTVFFHDLEEKIEYL
IENQYYEPELFDRYSFDFVKSLFKRAYAAKFRFPTFLGAFKFYTSYALKTFDGQRYLERFEDRVCMVALLLAEGNGKLAE
EIVDEIISGRFQPATPTFLNAGKRQRGELVSCFLLRIEDNMESIGRSINSALQLSKRGGGVAFALTNLRESGAPIKKIEN
QSSGVIPVMKLLEDAFSYANQLGARQGAGAVYLHAHHPDIYAFLDTKRENADEKVRIKTLSLGVVIPDITFELAKRNEDM
YLFSPYDVERIYGVAFSDINVSEKYYEMVDDSRIRKTKINAREFFQTIAEVQFESGYPYVMFEDTVNRSNPIEGKIIMSN
LCSEILQVSKPSIYHDDLSYAEIGKDISCNLGSLNIAMTMDGDDLGKTVETAIRSLTAVSDQSDIRSVPSIERGNDMSHA
VGLGQMNLHGYLAREHVYYGSEEGLDFTNIYFYTVTYHAIRASMEIAKERGVTFEGFESSKYANGEFFAKYIEKEWEPQT
ERVRELFAKHHIPTREDWIQLAADVAQYGMYNQNLQAVPPTGSISYINGSTSSIHPIASKIEIRKEGKLGRVYYPAPFMT
NDNLEYFQDSYEIGYEKIIDTYAVATQHVDQGLSLTLFFRDTATTRDINRAQIYAWRKGIKTIYYIRLRQMALEGTEVEG
CVSCML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1481 YP_001800875.1 ribonucleotide-diphosphate reductase subunit alpha Not tested Not named Protein 0.0 75