Gene Information

Name : pyk (HMPREF0733_11827)
Accession : YP_003984718.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 2023220 - 2024698 bp
Length : 1479 bp
Strand : +
Note : COG: COG0469; Pfam: PF00224,PF02887; InterPro: IPR001697

DNA sequence :
ATGAGGCGCGCAAAAATCGTTGCAACCATTGGTCCGGCTATTTCTTCTCCCGAAAAAATTGCGGAAGCGATCAAGGCGGG
TATGAACGTTTCCCGTCTGAATATGAGTCACGGTGACCATGACGTTCACACTAACTCTTACACAACTATCCGTGAACAAT
CCGCGGCGTTGGGGAAAGAAGTAGCTATTCTTGCTGATCTGCAAGGTCCTAAGATCCGTTTGGAGCGCTTTGTAAACGGG
GAAGAATATCTAAAGCCTGGCGCTGATTTTACGATTACTTCTGAGGACGTTGAGGGTACCAAGGATATCTGTGGTACGAC
TTATAAAGGTCTTCCTGGCGATGTGAAGCCTGGCGATAAACTTTTGCTGGATGACGGTAAGATCCAACTGGAAGCCGTTG
AAGTAACTCCAACTCGTGTTCGCACTCGTGTGATTGTAGGCGGACCTATTTCAAACAATAAAGGCATCAACCTTCCTGGG
GCGGCCGTTTCTCTTCCCGCACTGACCGAGAAGGATGAGGCTGACCTTCGTTTTGCCCTGAATTTGGGCGTAGATATTAT
TGCTCTTTCCTTTGTACGTAGCGGGAAAGACGTAAACCGCGTTCATGAGATCATGGCCGAAGAGGGTATCCGTATTCCGG
TGATTGCCAAGATCGAAAAGCCTCAAGCCGTTGATAATCTGCAAGATATTATCGACAAGTTTGATGGCATCATGGTCGCC
CGTGGCGACCTTGGCGTGGAACTGCCGTTCTCTGAGGTGCCACTGGTTCAGAAGAAAGCTATTGAGATGGCTCGTCGCTG
GGCTAAGCCCGTTATCGTGGCAACTCAGGTACTTGAGTCCATGATCTCTAGCCCGACTCCTACGCGCGCGGAAGTCTCTG
ACTGTGCAAACGCAATCTTGGATGGCGCCGATGCGGTGATGCTCTCCGGCGAGACTTCGGTAGGCAATTACCCCATTATT
ACCATTGCGGCAATGGCCTCCATTATTCGTGATACTGAGGAAAAAGGTCTATACCGCGTACCACAGCTGGACCGTAAGCC
CCGTACCCGTGGTGGTGCCATCACGCGTGCAGCTGTAAACATTGCGGAACAATTGGATGTAGATTACATTAGTACTTTTA
CCCAGACGGGTGACTCAGCACGCCGTTTAGCACGTCTACGCCCTGCGCAGCCGGTACTTGCTTTCACCCCCAACCCAAAG
GTGCGTGCTTTTATCTCACTGTTGTGGGGTGTTGAAGCTGCGCATGCGCCGGTGGCGACCAACATTGACGGTACGACCGA
CATCGTAAATGACTACCTGGTCGAGCATAAGCTCGCAGAACCGGGTGATCTTATTGTGATTGCTGCAGGTTCGCCTCCCG
GGGTGGCGGGATCAACCAATATGGTTAAGGTACACCGTATTAAGGAACAGGGTTCCGGCGAACATGAACCGGAAGAGCGT
GAGCACCTGCGCCCCTACGGGGAAGACGAACATAAGTAA

Protein sequence :
MRRAKIVATIGPAISSPEKIAEAIKAGMNVSRLNMSHGDHDVHTNSYTTIREQSAALGKEVAILADLQGPKIRLERFVNG
EEYLKPGADFTITSEDVEGTKDICGTTYKGLPGDVKPGDKLLLDDGKIQLEAVEVTPTRVRTRVIVGGPISNNKGINLPG
AAVSLPALTEKDEADLRFALNLGVDIIALSFVRSGKDVNRVHEIMAEEGIRIPVIAKIEKPQAVDNLQDIIDKFDGIMVA
RGDLGVELPFSEVPLVQKKAIEMARRWAKPVIVATQVLESMISSPTPTRAEVSDCANAILDGADAVMLSGETSVGNYPII
TIAAMASIIRDTEEKGLYRVPQLDRKPRTRGGAITRAAVNIAEQLDVDYISTFTQTGDSARRLARLRPAQPVLAFTPNPK
VRAFISLLWGVEAAHAPVATNIDGTTDIVNDYLVEHKLAEPGDLIVIAAGSPPGVAGSTNMVKVHRIKEQGSGEHEPEER
EHLRPYGEDEHK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-61 45
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 1e-61 45
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 1e-61 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-61 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_003984718.1 pyruvate kinase VFG0479 Protein 6e-62 45