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Name : HMPREF0733_11337 (HMPREF0733_11337) Accession : YP_003984228.1 Strain : Rothia dentocariosa ATCC 17931 Genome accession: NC_014643 Putative virulence/resistance : Unknown Product : transcription accessory protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 1456349 - 1458784 bp Length : 2436 bp Strand : + Note : COG: COG2183; Pfam: PF00575; InterPro: IPR006641 DNA sequence : ATGAGCGAAAAACACGAGCGCACCGAAGCTACGAACACCCGCATCCTGACGATGCTCTCTAACGAACTAGACCTCAAACC CACGCGTGTTCGTGCCGCCGTAAACCTGCTCGACTCCGGGTCTTCGGTTCCGTTTATCGCTCGATACCGCAAAGAAGCTA CGGGCGCGCTCACCGACACCCACCTGCGTGCTATCAGCACCCGGCTCGATGCCCTGCGTGCGCTCGAAACTCGCCGCGAG AATATTCTCAGCTCGCTTGCTCAACGCCGCGAAGACGGGCTGATCGATCCGCTTACCTACGAACAGCTCATCACGGGGGT GGGGGCGGCATCCAGTAAACAAGACCTCGAAGCGCTCTACGCGCCCTACCGGAGTGAGCGCATCACCAAGGCGCAGCGTG CCCGCGCGGCAGGTCTGGAGGCGCTCGTTGAAGACCTGCTCGAAGTTCCCCTTGCCGGGGTCTACGATATTGCCGCAGCC TATGTGGACGAACCGGATGAAACCGACGATAAACATGCGGCAGATGCCGGAAAATCCGAAGACGCCGGAATTACAACGGT GGAAGAAGCCCTCGACGGCGCCCGCGCTATCCTGATCGACCGGGCGCTGACCGACCCAACGCTCGCCGAACGCCTTCACG AAAGAATGGTTGCCACCGGAATGATCTCTAGTCGAGTTATCGCCGGGAGAGAAGCCGAAGGGGCAAAATTTGCCGACTAT TTCGACTTCTCCGATAGTATCAGGCGTATCCGCCCGCACCGGGTTCTCGCCCTGCTTCGCGCCAAAGAAGCCGGAATCGT GCGGCTCAGTATTGACGGTGCCACACCAGCTCCGCCCCTGAGCAAACTCCGCGGAGAAGCGCGCGCCGCCGCGCTTGCCC TCGCCGAAAATTACGAGAACGTTCGTTCGGGATACGAGCGTGAAGTCGCCGCCGCGCTGCGCATACCCGTGCAGGTTCTC AACACCGTCGACAGCGAAGACCGTGTGCTCGGCTGGCTCGCCGCAACCGTGCGCACCGCATGGCGCAAACGGCTACACCC CTGCCTGGCAGACCGCATACGCAATGCCCTCTTCGAGATGGCAGAACGCGAAGCCATCACCGTTTTCGCCTCGAACCTGC GCGACCTTCTGCTTGCCGCGCCCGCCGGGCAAAAAGTCACCCTCGGGCTTGACCCGGGGCTGCGTAACGGCGTGAAATGC GCGGTTATTGACGGCACCGGGCACGTGCTGAAAACCTTCACGGTGTACCCGCACGCGCCTCGATACGACCGTGCCGGTGC GCTCGCTGCCCTCGAGGATGCGGTGCTCACCCACGGCGTGGAACTTATTGCCATTGGCAACGGCACCGCCTCACGTGAGA CAGATAAACTCGCCGCCGAACTGCTGGCGAAGCTGCGTTCTCAAGGGTATAAGGCGGCACAAAAGGTTACCGTATCAGAG GCGGGGGCATCCGTATATTCGGCTTCTGAGCTCGCCAGCGAAGAGCTGCCCGATCTTGATGTAACGGTACGCGGGGCGGT CTCGATCGCTCGGCGGCTGCAAGACCCGCTCGCCGAACTCGTCAAAATTGATCCCCAGTCTTTAGGCGTAGGGCAGTACC AGCATGACGTCAGTGTGACCGCTTTAAGACGCGCCCTCGATAATACGGTTGAGGACTGCGTAAACGCGGTGGGGGTTCAC CTGAACAGCGCATCCGCCGCACTGCTTGCGCGTGTTGCCGGTTTTAACCGCACGATTGCCGAAAATATCGTGGCGTACCG GGACGAACATGGGGCTTTCACCACCCGGGAAGAGCTTCTGAACGTTCCTCGGTTAGGGGCTAAGGCCTATGAACAGGCGG CGGGATTCGTGCGGATTCTGCACGGTACCGAACCGCTGGATGCCTCTGCCGTGCACCCCGAATCGTACCCTGTGGCGCGG CGTATTATCGCCGATGCGCAGCGGAATCACGGGGCGCTCTGGCAATCCGGGCGGCTTATCGGCAGTGACGGGGAAGACCC GCTCACCGCGCTCGACCCCGCCGACTACGTGAACAGGAGCATCGGCGAATACACCGTGCACGATATTTTTGAGGAATTGC GCCGCCCCGGGCGTGACCCGCGCCCCGAATTTCGTACCGCACACTTCTCTGAGGATATCTCTCGCTTTGAGGACGTAACC GTTGGGATGGTGCTTGAGGGAACCGTCTCGAATGTGGCGGCCTTCGGTGCCTTCGTCGATATCGGGGTGCACCAAGATGG GCTGATTCATATCTCGCAGATGAGCCGCGAGTATGTTGCGAACCCGCACGATATTGTGCGAAGCGGCGATATCGTGACTG TGAGAGTTGTTGAGGTGGATGCGTCTCGCCGCCGTATTTCGCTCTCGCTGCTGGTAGATGCGGGTGAGCCGGGGCGCTCG GATGCGGTGCATAAGAAAACGAATAAACGTTCTTGA Protein sequence : MSEKHERTEATNTRILTMLSNELDLKPTRVRAAVNLLDSGSSVPFIARYRKEATGALTDTHLRAISTRLDALRALETRRE NILSSLAQRREDGLIDPLTYEQLITGVGAASSKQDLEALYAPYRSERITKAQRARAAGLEALVEDLLEVPLAGVYDIAAA YVDEPDETDDKHAADAGKSEDAGITTVEEALDGARAILIDRALTDPTLAERLHERMVATGMISSRVIAGREAEGAKFADY FDFSDSIRRIRPHRVLALLRAKEAGIVRLSIDGATPAPPLSKLRGEARAAALALAENYENVRSGYEREVAAALRIPVQVL NTVDSEDRVLGWLAATVRTAWRKRLHPCLADRIRNALFEMAEREAITVFASNLRDLLLAAPAGQKVTLGLDPGLRNGVKC AVIDGTGHVLKTFTVYPHAPRYDRAGALAALEDAVLTHGVELIAIGNGTASRETDKLAAELLAKLRSQGYKAAQKVTVSE AGASVYSASELASEELPDLDVTVRGAVSIARRLQDPLAELVKIDPQSLGVGQYQHDVSVTALRRALDNTVEDCVNAVGVH LNSASAALLARVAGFNRTIAENIVAYRDEHGAFTTREELLNVPRLGAKAYEQAAGFVRILHGTEPLDASAVHPESYPVAR RIIADAQRNHGALWQSGRLIGSDGEDPLTALDPADYVNRSIGEYTVHDIFEELRRPGRDPRPEFRTAHFSEDISRFEDVT VGMVLEGTVSNVAAFGAFVDIGVHQDGLIHISQMSREYVANPHDIVRSGDIVTVRVVEVDASRRRISLSLLVDAGEPGRS DAVHKKTNKRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 6e-165 | 47 |
