Gene Information

Name : pdxS (HMPREF0733_11099)
Accession : YP_003983990.1
Strain : Rothia dentocariosa ATCC 17931
Genome accession: NC_014643
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1186431 - 1187342 bp
Length : 912 bp
Strand : -
Note : COG: COG0214; Pfam: PF01680,PF00290; InterPro: IPR001852

DNA sequence : 
ATGACTGAACAGACTAATTCCCCAGTAACCGGCTCCCCGCTCGTGAAGCGCGGGCTTGCCGACATGCTCAAGGGCGGCGT
CATTATGGACGTCGTCACCCCCGAACAAGCCAAGATCGCCGAAGATGCTGGCGCCGTCGCCGTCATGGCGCTTGAGCGCG
TACCCGCCGATATTCGTGCTCAGGGCGGTGTGGCCCGTATGTCCGACCCCGATATGATTGAGGGCATCATTAACGCCGTC
TCGATTCCCGTGATGGCGAAGGCGCGCATCGGGCATTTTGTTGAGGCGCAGATTCTTGAAAGCCTCAAGGTGGATTACAT
TGATGAGTCAGAGGTGCTCTCCCCCGCCGATTACGTGAACCACATTGACAAGCACCAGTTCACGGTACCGTTCGTATGCG
GCGCCACCAACCTGGGCGAGGCGCTGCGCCGTATCGCCGAGGGTGCCGCTATGATCCGCTCGAAGGGTGAGGCTGGCACC
GGTGACGTCTCGGAGGCGACCAAGCATATCCGCACCATTAAGCGCCAGATCGCCGAGCTGCAGGGCCTGTACAACACCAT
GCCCGACGAGCTGTACGTGAAGGCGAAAGAACTTGCCGCCCCCTACGACCTGGTGCTCGAAGTTGCGAAGACCGGTAAGC
TGCCCGTGGTCATGTTTACCGCCGGTGGCGTGGCAACCCCCGCCGACGCAGCCATGATGATGCAACTGGGCGCGGACGGC
GTATTCGTCGGTTCCGGTATCTTCAAATCCGGCAACCCCGAGGCACGCGCTAAGGCCATCGTGAAGGCAACCGCGTTCTA
CAACGACCCCGAAAAACTGGCGGATGCATCGCGCGGTTTGGGCGAGGCCATGGTCGGCATCAACGTTGCCGATCTACCCG
CGCCGCATCGTCTGGCGGAGCGCGGCTGGTAA

Protein sequence : 
MTEQTNSPVTGSPLVKRGLADMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVARMSDPDMIEGIINAV
SIPVMAKARIGHFVEAQILESLKVDYIDESEVLSPADYVNHIDKHQFTVPFVCGATNLGEALRRIAEGAAMIRSKGEAGT
GDVSEATKHIRTIKRQIAELQGLYNTMPDELYVKAKELAAPYDLVLEVAKTGKLPVVMFTAGGVATPADAAMMMQLGADG
VFVGSGIFKSGNPEARAKAIVKATAFYNDPEKLADASRGLGEAMVGINVADLPAPHRLAERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-110 81
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 2e-110 81
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 3e-110 81