Gene Information

Name : AXYL_06301 (AXYL_06301)
Accession : YP_003982309.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 6770452 - 6772287 bp
Length : 1836 bp
Strand : +
Note : -

DNA sequence :
ATGATCATCCCTACCCACTTTCGAACCGCACTGGTGTTTCTGTTTGACCTGGCGGCAATCCTCATCGCCTGGCTGGGGGC
ATTCCTCATCCGCTTCAATTTCGAATGGCCGACCGAGTGGGAAGGCCCCATAGCGCGAGCGCTGCTCGTCTTGCTGCCCG
TGCAAATCATCGCCTGCCGCTGGGCGGGCCTGTATCGCGGCATGTGGATCTTCGCCAGCCTGCCAGACCTCAAGCGCGTC
CTGAACGTGGTGCTCGCCTCAACGGTCGCCCTGCTGCTCTTTGCCTTCCTCAATCGTGGCCAGCCCGCATTGCCGCGTTC
CATCCTGGTGCTGTATCCCTTGCTGCTGCTCTTGGTCATGGGCGGTGGACGCGCCGCCTGGCGCATGTGGAAGGAACACA
GGCTATACCGCGCGGGCTTCGGCAAGGGCACGCCCGTCGTCGTGGTCGGCGCGGGCACGGCTGGCGCCATGCTGGTCCGC
GAACTGGGTCGTAGTTCCGATTGGCATGTGGTGGCGTTGGTGGACGACGATCCCGCCAAGCGAGGCCTGGAAATCTCCGG
CTGTCGCGTGGCCGGCGGCACCAACAGGCTGCCAGAAATCCTCAATGACTACGGCGCCAAGCACGTTATCCTGGCCATTC
CTTCCGCCAAGGGAACCGCCATCCGCCACGTGTCCGACATCGTGACCCGCGCGGGCGCGTCGCTGTTCACCGTGCCGGGG
TTGAGCGAGCTGATGAGCGGCCGTGTCGCCATCAACATGATGCGTCCGGTAAAGATCGAGGATCTGTTGGGCCGCGAATC
CGTGCATATCGACAACGTCAATATCCACGAAATGATTGCCGGCAAGCAGATCCTGGTGACCGGCGCGGGCGGCTCGATCG
GCAGCGAACTGTGCCGTCAGCTTGCACGCTTCGCGCCGGCCGCCATCATCCTGTACGAGGTGAGCGAGTTCGCCCTCTAC
ACCATCGAACAATGGTTCACCGACAACCAGCCCTCGGTGCGCGTCATCCCGCTAGCGGGAGACGTCAAGGACGCCACGCG
CGTGGATGAGGTCTTTGCGCGCTACAAGCCGGACATCGTGTTCCATGCGGCGGCGTACAAGCACGTGCCTCTCATGGAGA
TCGACAATGCCTGGCAAGCTGTGCGCAATAACGTGCTCGGCACCCTGAACGTGGCCCAATGCGCCGAACGCTACCAGGCG
CAGCGCTTCGTCCTCATCTCTACCGACAAGGCCGTGAACCCCACCAACGTGATGGGAGCGACGAAGCGCATGGCTGAGAT
GGTGTGCGAAGTGCTGCATGGACGGAACGGCAAGACGCGGTTCCAGATCGTCCGTTTCGGGAACGTGCTGGGCAGCACGG
GCAGCGTCATTCCCAGGTTCCAATCCCAAATCTCGCGCGGCGGCCCCGTTTCCGTCACCCACCCCGAGATTACGCGTTAC
TTCATGTCCATTCCCGAAGCGGCTCGGCTGGTGTTGCAGGCGGCCGCCATGGGCAACGGCGGAGAAATCTTCGTGCTGGA
CATGGGCGAACCCGTCAAGATCGCGGATCTGGCGCGCAACATGATCCGCCTCTCGGGATTCACCGAAGAGGAGATCCACA
TCGAATTCACGGGGCTGCGCCCGGGCGAGAAACTTTACGAAGAGTTGCTCGCGGATTGTGAAGAAACACTGGAAACACCG
CACCCCAAACTGCGGATCGCGCGTTCCCGTCCCGTTCCCGACGGTTTCCGTGAAGCCGGCATGAGCTGGATCGCAGGATC
CGAACCCGTGTCAGACGAGGACGTGCGCGCGGAATTGAAATGCTGGATGCCCGAGTACGAGCCCTCCAAGCAATGA

Protein sequence :
MIIPTHFRTALVFLFDLAAILIAWLGAFLIRFNFEWPTEWEGPIARALLVLLPVQIIACRWAGLYRGMWIFASLPDLKRV
LNVVLASTVALLLFAFLNRGQPALPRSILVLYPLLLLLVMGGGRAAWRMWKEHRLYRAGFGKGTPVVVVGAGTAGAMLVR
ELGRSSDWHVVALVDDDPAKRGLEISGCRVAGGTNRLPEILNDYGAKHVILAIPSAKGTAIRHVSDIVTRAGASLFTVPG
LSELMSGRVAINMMRPVKIEDLLGRESVHIDNVNIHEMIAGKQILVTGAGGSIGSELCRQLARFAPAAIILYEVSEFALY
TIEQWFTDNQPSVRVIPLAGDVKDATRVDEVFARYKPDIVFHAAAYKHVPLMEIDNAWQAVRNNVLGTLNVAQCAERYQA
QRFVLISTDKAVNPTNVMGATKRMAEMVCEVLHGRNGKTRFQIVRFGNVLGSTGSVIPRFQSQISRGGPVSVTHPEITRY
FMSIPEAARLVLQAAAMGNGGEIFVLDMGEPVKIADLARNMIRLSGFTEEEIHIEFTGLRPGEKLYEELLADCEETLETP
HPKLRIARSRPVPDGFREAGMSWIAGSEPVSDEDVRAELKCWMPEYEPSKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 7e-91 48
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 4e-89 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AXYL_06301 YP_003982309.1 polysaccharide biosynthesis protein VFG1300 Protein 1e-87 49