Gene Information

Name : irlR5 (AXYL_05742)
Accession : YP_003981756.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : transcriptional activator protein IrlR 5
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 6179070 - 6179744 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence : 
ATGCGTATCCTCTTGATCGAAGATGAAAGAAAGCTCGCGGACTACGTCCGCAAAGGACTGACCGAACACAACTACGTGGT
CGACGTCGCCCGCGACGGCATAGACGGGCGGCACGCCGCCATCGAAGGCGACTACGACGTAGTGGTGCTGGACGTGATGC
TGCCCGGCGTCGACGGCTTCGGCGTGCTGGCGGACCTGCGCAAGCACAAGCAGACGCCCGTCCTGATGCTGACCGCCCGC
GACAAAGTGGAAGACCGGGTACGCGGCCTGGAGGGTGGCGCGGACGACTACCTCGTCAAGCCCTTCGCGTTTTCAGAGCT
GCTGGCGCGGATCCAGGCGCTGCTGCGCCGCGGCCGCGGGCAGGAATCCACGCTGCTCAAACTCGCCGACCTGGAGATGG
ACCTGGCGCGGCGCAAGGCGCAAAGAGGCGGCATGCGCCTGGACCTGACGGCCAAGGAGTTCACGCTGCTGACGCTGATG
CTGCGGCGCCATGGCCAGGTGCTGTCCAGGACCGTGCTTGCGGAGCAGGTCTGGGACATGAACTTCGACAGCGACACCAA
CGTCATCGAGGTGGCCGTGCGGCGCCTGCGGGCGAAGATCGACGACCCGTTCGAGACCAAGCTGCTGCATACCGTGCGCG
GCATGGGCTATGTGCTGGAGCTGCGCGAAAAATGA

Protein sequence : 
MRILLIEDERKLADYVRKGLTEHNYVVDVARDGIDGRHAAIEGDYDVVVLDVMLPGVDGFGVLADLRKHKQTPVLMLTAR
DKVEDRVRGLEGGADDYLVKPFAFSELLARIQALLRRGRGQESTLLKLADLEMDLARRKAQRGGMRLDLTAKEFTLLTLM
LRRHGQVLSRTVLAEQVWDMNFDSDTNVIEVAVRRLRAKIDDPFETKLLHTVRGMGYVLELREK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-58 56
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-57 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0197 Protein 5e-67 62
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0638 Protein 1e-55 61
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0083 Protein 3e-61 60
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0125 Protein 5e-65 60
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0111 Protein 5e-62 56
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0308 Protein 2e-60 56
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 BAC0347 Protein 2e-54 53
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 AE000516.2.gene3505. Protein 1e-30 42
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 HE999704.1.gene1528. Protein 2e-33 41
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 CP001918.1.gene5135. Protein 3e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 VFG0596 Protein 6e-59 56
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 VFG1389 Protein 7e-37 44
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 VFG1390 Protein 1e-41 43
irlR5 YP_003981756.1 transcriptional activator protein IrlR 5 VFG1386 Protein 2e-34 41