|
Name : lysS (AXYL_03941) Accession : YP_003979976.1 Strain : Achromobacter xylosoxidans A8 Genome accession: NC_014640 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 4244840 - 4246363 bp Length : 1524 bp Strand : + Note : - DNA sequence : ATGACCGACCACTCGACCACTCCGGCGCCCGCCCAGGACGAAAACCGCTTGATCGCCGAACGGCGCGCCAAGCTGGCCAA ACTGCGCGAAACCGGGGTCGCGTACCCCAACGACTTCGTTCCCGACGCCCGCGCCGCCGCCCTGCATGACAAGTACGACG GCCAGGAGCAGGAAGCGCTTGCCGCCAGCCCCGTCACCGTCAAGGTCGCCGGCCGCATGATGCTCAAGCGCGTCATGGGC AAGGCCAGCTTCGCCACGCTGCAGGACAGCACCGGCCGCATCCAGATCTACCTGGACCGCGGCACCCTGGGCGAAGACAG CTACGCCGCGTTCAAGCAATGGGACATCGGCGACATCATCGCGATCGAAGGGTCGGTCTTCAAGACCAACAAGGGCGAAC TCTCGGTGCACGCCGCCAGCGCGCGCCTGCTGTCCAAGTCGCTGCGCCCGCTGCCCGACAAGTTCCACGGCGTGGCCGAC CAGGAACTGCGCTACCGCCAGCGCTACGTCGACCTCATCATGACGGACGCCACGCGCCGCACCTTCGAGGCGCGCAGCAA GGCCGTGGGCAGCATCCGCCAGTTCATGCTGAACGCCGGCTTCCTCGAAGTGGAAACCCCCATGCTGCACCCGATTCCGG GCGGCGCGGCAGCCAAGCCCTTCGTCACGCACCACAATGCGCTGGACATGGAAATGTACCTGCGCATCGCGCCCGAGCTC TACCTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTCTTCGAAGTCAACCGCAACTTCCGCAACGAGGGCGTGAGCCC GCGCCACAATCCTGAATTCACCATGATGGAGTTCTATGCGGCCTTTGCGGAATACCGCTGGCTCATGGACTTCACGGAAG AGCTGATCCGCCAGGCCGCCATCTCGGCCACCGGCAGCGCGGTGCTGACCTACGGCGAACGCGAACTCGATCTGTCCAAG CCGTTCGACCGCCTGACCATCTGCGAAGCTATCCTCAAGTACGCCCCCGGCTACACCCAGGCGCAACTGGACGATGCGGC CTTCGTGCGCGCCGAACTCAAAAAGCTGGGAGCCGATGCCGACGGCCCGGTGCTGTCGCGCGCCGGACTGGGCGCGCTGC AGCTGGCCCTGTTCGAAGAGACCGCCGAAGCCAAGCTCTGGAACCCCACCTACATCATCGACTACCCGGTGGAAGTCTCG CCGCTGGCGCGCGCCTCCGATACCCGCGAGGGCATCACCGAGCGCTTCGAACTCTTCATGACCGGCCGCGAAATCGCCAA CGGCTTCTCGGAATTGAACGATCCCGAAGACCAGGCCGAGCGCTTCCGCTCGCAGGTCGAGGCCAAGGACGCGGGCGACG AGGAAGCCATGTTCTACGACGCGGACTACATCCGCGCCCTGGAGTACGGCATGCCTCCGACGGGCGGCTGCGGCATCGGC ATCGACCGCCTGGTCATGCTGCTGACCGACAGCCCCAGCATCCGCGACGTCATCCTGTTCCCGCACCTGCGCCGTGAAGA CTAA Protein sequence : MTDHSTTPAPAQDENRLIAERRAKLAKLRETGVAYPNDFVPDARAAALHDKYDGQEQEALAASPVTVKVAGRMMLKRVMG KASFATLQDSTGRIQIYLDRGTLGEDSYAAFKQWDIGDIIAIEGSVFKTNKGELSVHAASARLLSKSLRPLPDKFHGVAD QELRYRQRYVDLIMTDATRRTFEARSKAVGSIRQFMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMEMYLRIAPEL YLKRLIVGGFERVFEVNRNFRNEGVSPRHNPEFTMMEFYAAFAEYRWLMDFTEELIRQAAISATGSAVLTYGERELDLSK PFDRLTICEAILKYAPGYTQAQLDDAAFVRAELKKLGADADGPVLSRAGLGALQLALFEETAEAKLWNPTYIIDYPVEVS PLARASDTREGITERFELFMTGREIANGFSELNDPEDQAERFRSQVEAKDAGDEEAMFYDADYIRALEYGMPPTGGCGIG IDRLVMLLTDSPSIRDVILFPHLRRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-137 | 55 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-83 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003979976.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-137 | 55 |
