Gene Information

Name : AXYL_03776 (AXYL_03776)
Accession : YP_003979811.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4050149 - 4051003 bp
Length : 855 bp
Strand : +
Note : -

DNA sequence :
GTGAGGTACGCCTTTGTGCAGGCTCATCAGCAGCAGTTCCGGGTCGCTCGGTTATGCCGGGCCTTGCACGTCAGCCGCAG
CGGGTATTACGACTGGCAACGTCGTGAACCCTCGGCAAGGCAGCAAGAGGACGTCAAGCTGCTCGCGGCCATCGAGCAGA
CCCATCAGACCTGCCGGCAAGCGTATGGCGCGGAAAAGACCTGGCGCGCGCTTAACGCCAACGGCGTGGCGTGCGGCAAG
CATCGCGTCGCAAGACTGCGACGCCAAGCCGGCATCGAGGCGCTGCGCAAGCAGCGGTTTCGTCGGCTGGAGAAGCATTC
GCTGCTGGGGCCAGCCCCGAACCGCCTGCAACGTCAGTTCACCGTGCAATGTCCCAATAAAGTCTGGGTGGGCGACATAA
CGGTTGTACCAACACGGACAGGCTGGCTATATCTGGCCGTACTGCTGGATCTCTACTCTCGGTCGGTGATCGGCTGGAGC
ATGGCCGAGAAGGCCGACCGCAGGTTGTTGATCCATACACTTCAAATGGCCCTAGCCCGGCGCCGTCCCGATCCTGGACT
GTTGCACCACAGCGATCGCGGTGCGCAGTACAGTTCGGCAGAGTACCGAGGCATGCTTAAGGACCACGGCATCATCATCA
GCATGAGCGCCAAGGGGGATCCCTACGACAATGCCGTCGCAGAGAGCTTCTTCAGCAACTTAAAGAACGAATTAACGCAT
CACAAGGTCTTCCACAGCAGGGAGCATGCGCGGCTGGCGATCTTTAACTACATTGAGGTCTTCTATAACCGCCAGCGAAT
CCACCAGGGGCTAGGTTATCGAACCCCTGCCCAGGTCGAGGCCTCCGTGTCTTAA

Protein sequence :
MRYAFVQAHQQQFRVARLCRALHVSRSGYYDWQRREPSARQQEDVKLLAAIEQTHQTCRQAYGAEKTWRALNANGVACGK
HRVARLRRQAGIEALRKQRFRRLEKHSLLGPAPNRLQRQFTVQCPNKVWVGDITVVPTRTGWLYLAVLLDLYSRSVIGWS
MAEKADRRLLIHTLQMALARRRPDPGLLHHSDRGAQYSSAEYRGMLKDHGIIISMSAKGDPYDNAVAESFFSNLKNELTH
HKVFHSREHARLAIFNYIEVFYNRQRIHQGLGYRTPAQVEASVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 6e-48 45
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 6e-48 45
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 3e-48 44
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 5e-48 44
unnamed AAF09022.1 unknown Not tested SHI-O Protein 2e-48 44
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 4e-48 44
unnamed AAF09030.1 unknown Not tested SHI-O Protein 4e-48 44
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 4e-48 44
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 4e-42 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 4e-42 44
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 7e-54 43
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-54 43
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 7e-54 43
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 3e-47 43
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 1e-41 43
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 4e-43 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AXYL_03776 YP_003979811.1 integrase VFG1706 Protein 2e-48 44
AXYL_03776 YP_003979811.1 integrase VFG1631 Protein 2e-43 42