Gene Information

Name : fliI (AXYL_02775)
Accession : YP_003978810.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 2972082 - 2973557 bp
Length : 1476 bp
Strand : -
Note : -

DNA sequence :
GTGAGCGCCAATCCGGTCCCCGGCCAGCCGGCCGCGACTGCCGTGCCGGTCATCGACCGCTGGCAGACCCAGCTGCAGAT
CGGCTCGATCCGCGCCGCCTCGACCGACCCCTGGCTGGTCAGCGGCAAGATCACGCGCGCCACCGGCCTGGTGCTGCACG
CGACCGGCCTGCGCCTGCCGGTAGGAGCGGCGGCCCGCATTGAAATCGCCCGCGGCCACGACCATTGGGCGGACGCCGAA
GTCGTCGGCTTCGACGGCCACACCCTGTATCTGATGCCGCAAGCCGACATTTCCGGCTTGCCGCCCGGCGCGCGCGTCGT
GCCTGGCGAGCCTCCCGTCCAGCGCCAGATCCCGCTGCCGCGCAAGGCCGAACTGAACGGCAACGCCAAGCCGCAGCTGG
GCCGCCACCTGCCCGTGGGCAACGCCTTGCTGGGCCGGGTGCTGGATGGCGCCGGCCGGCCGCTGGACGGGCTGGGTCCG
CTCACGGGCGCCGAACTGGCGCCCCTGTCCGCCCAGCCGATCAACCCGCTGTCGCGCGCGCCCATCGACACGGTGCTGGA
CACGGGTGTGCGCGCCATCAACGGCCTGCTCACGGTCGGCCGCGGCCAGCGCATGGGCCTGTTCGCCGGCTCCGGCGTCG
GCAAGAGCGTGCTGCTGGGCATGATGGCCCGCTATACCAAGGCCGACGTCATCGTGGTCGGACTGATTGGCGAACGCGGC
CGCGAAGTCAAGGAATTCATCGAACACAACCTCGGCCCCGAAGGCCTGGCGCGCTCGGTGGTGGTGGCCGCGCCGGCCGA
CGTGTCGGCGCTGCTGCGCCTGCAAGGCGCGGCCTATGCCACGCGCCTGGCCGAGCACTTCCGCGATCAGGGCCTGGACG
TGCTCCTGATCATGGACTCGCTGACCCGCTATGCCATGGCGCAGCGCGAAATCGCCCTGGCGATCGGCGAGCCGCCCGCC
ACCAAAGGCTATCCGCCCTCGGTCTTCGCCAAACTGCCGATGCTGGTCGAACGCGCCGGCATGGGCGCGCCTGGGGCCTC
CGGCAAGGCCGGCTCGATCACCGCGTTCTACACCGTGCTGGCCGAAGGCGACGACCAGCAGGATCCGATTGCCGATTCGG
CCCGCGCCATCCTGGACGGCCACGTCGTGCTGTCGCGCCACCTGGCCGAAGCGGGCCATTACCCCGCCATCGACATCGAA
GCGTCGATCTCGCGCGCCATGACCTCGCTGATCACACCCGAGCAGTTCGCCGTGGTGCGCCGCTTCAAGCAAAGCCTGTC
GCGCTTCCAGCGCAACCGCGACCTGATTGCGGTGGGCGCCTACGCCGCCGGCAACGATCCGCAGCTGGACGAGGCCATCG
CCCGTTATCCGCGCCTGGAAGCCTTTCTGCAGCAAGACATCGGCGAAAACGTCGGCTACGAAGCCGCCGTCAGCCAGTTG
CGCGCCAGTTTCGAATTGAGGGACGCTTATGCCTAG

Protein sequence :
MSANPVPGQPAATAVPVIDRWQTQLQIGSIRAASTDPWLVSGKITRATGLVLHATGLRLPVGAAARIEIARGHDHWADAE
VVGFDGHTLYLMPQADISGLPPGARVVPGEPPVQRQIPLPRKAELNGNAKPQLGRHLPVGNALLGRVLDGAGRPLDGLGP
LTGAELAPLSAQPINPLSRAPIDTVLDTGVRAINGLLTVGRGQRMGLFAGSGVGKSVLLGMMARYTKADVIVVGLIGERG
REVKEFIEHNLGPEGLARSVVVAAPADVSALLRLQGAAYATRLAEHFRDQGLDVLLIMDSLTRYAMAQREIALAIGEPPA
TKGYPPSVFAKLPMLVERAGMGAPGASGKAGSITAFYTVLAEGDDQQDPIADSARAILDGHVVLSRHLAEAGHYPAIDIE
ASISRAMTSLITPEQFAVVRRFKQSLSRFQRNRDLIAVGAYAAGNDPQLDEAIARYPRLEAFLQQDIGENVGYEAAVSQL
RASFELRDAYA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-79 53
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-66 49
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 3e-66 49
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 1e-59 48
escN NP_290268.1 hypothetical protein Virulence LEE Protein 6e-66 48
escN AAC38383.1 EscN Virulence LEE Protein 6e-66 48
ECs4568 NP_312595.1 EscN Virulence LEE Protein 6e-66 48
escN CAI43874.1 EscN protein Virulence LEE Protein 5e-66 48
escN AAC31513.1 L0034 Virulence LEE Protein 4e-66 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-66 48
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 4e-66 48
escN AAK26715.1 EscN Virulence LEE Protein 2e-65 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 1e-65 48
escN AAL57542.1 EscN Virulence LEE Protein 2e-65 48
escN YP_003223475.1 translocator EscN Virulence LEE Protein 7e-66 48
escN CAC81862.1 EscN protein Virulence LEE II Protein 9e-66 48
unnamed AAL06369.1 EscN Virulence LEE Protein 3e-64 48
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 47
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-77 47
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 7e-77 47
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 2e-78 47
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-79 47
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-79 47
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-77 47
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-78 47
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-78 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 3e-64 46
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 46
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-64 46
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-64 46
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-64 46
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-55 46
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-55 46
lscN AAO18044.1 LscN Virulence TTSS locus Protein 1e-67 45
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-59 45
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-55 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-55 44
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 7e-55 44
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 7e-55 44
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 6e-53 43
invC AAS66861.1 InvC Not tested SSR-2 Protein 1e-51 43
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 2e-63 42
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 4e-64 42
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 4e-64 42
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 7e-67 42
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 3e-60 42
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 3e-60 41
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-60 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG2331 Protein 2e-129 69
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG2499 Protein 6e-134 67
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-114 60
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0812 Protein 2e-66 48
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0730 Protein 3e-66 48
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG2459 Protein 9e-62 47
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG2144 Protein 7e-82 46
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0515 Protein 8e-65 46
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0192 Protein 1e-73 45
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0048 Protein 4e-78 45
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0390 Protein 6e-67 45
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG0555 Protein 3e-55 44
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG1008 Protein 4e-53 44
fliI YP_003978810.1 flagellar protein export ATPase FliI VFG1778 Protein 1e-57 41