Gene Information

Name : fliP (AXYL_02768)
Accession : YP_003978803.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 2966741 - 2967532 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTTGCCCACTAGCACGACACCCGCCCGCGCCCGGCCAGGCGCGCTGCACCTGCTCGGCGCCGCGGCCCTGCTGGG
CCTGGCCCTGTTTCCCGCAGGGGTCGTCGCGCAGGCCACCTTGCCTGCGTTGACCGCCACGCCGGGGCCTAACGGGTCCG
AAACCTATTCGCTCAGCATGCAGACCCTGCTGCTGATGACGTCGCTGTCGTTCCTGCCCGCCGCGCTGCTGATGATGACG
GGATTCACCCGCATCATCATCGTGCTGGGCCTGCTGCGCAGCGCCATGGGCACGGCCATGTCGCCGCCCAACCACGTGCT
GATCGGCCTCGCGCTGTTCCTGACCTTCTATACGATGTCGCCGGTGTTCGACAAGATCTACACCGACGCCTATAAGCCGC
TATCCGAGGGATCGATCCAGTTCGAAGCCGCCGTGGAACGCGCGGCCGGTCCGCTGCGCACCTTCATGCTGCACCAGACA
CGCGAAAACGATCTGTCGCTGTTCGCCAACCTGGCGAAGCAGCCTGCCCTGGAAGACCCCTCGCAGGTGCCCCTGCGCAT
CCTGGTGCCGGCCTTCATCACCAGTGAACTCAAGACCGCGTTTCAGATCGGCTTCACCATCTTCATCCCCTTTCTCATCA
TCGACCTGGTCGTCGCCAGCGTGCTGATGGCGCTGGGCATGATGATGGTGCCGCCGGTGACGGTGGCGCTGCCCTTCAAG
CTGATGCTCTTCGTGCTGGCCGACGGCTGGAACCTGCTCATGGGTTCGCTGGCCCAGAGCTTCTATCAATAA

Protein sequence :
MSLPTSTTPARARPGALHLLGAAALLGLALFPAGVVAQATLPALTATPGPNGSETYSLSMQTLLLMTSLSFLPAALLMMT
GFTRIIIVLGLLRSAMGTAMSPPNHVLIGLALFLTFYTMSPVFDKIYTDAYKPLSEGSIQFEAAVERAAGPLRTFMLHQT
RENDLSLFANLAKQPALEDPSQVPLRILVPAFITSELKTAFQIGFTIFIPFLIIDLVVASVLMALGMMMVPPVTVALPFK
LMLFVLADGWNLLMGSLAQSFYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 8e-29 43
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 8e-29 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 8e-29 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 6e-28 42
XC_3016 YP_244084.1 type III secretion system protein Virulence Hrp PAI Protein 8e-30 41
hrcR NP_636600.1 type III secretion system protein Virulence Hrp PAI Protein 8e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG2338 Protein 2e-69 74
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG2494 Protein 2e-68 71
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG1259 Protein 8e-56 59
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG2016 Protein 7e-55 58
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG0044 Protein 2e-33 42
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG0394 Protein 8e-31 41
fliP YP_003978803.1 flagellar biosynthetic protein FliP VFG0188 Protein 1e-30 41