Gene Information

Name : dnaB (AXYL_01842)
Accession : YP_003977891.1
Strain : Achromobacter xylosoxidans A8
Genome accession: NC_014640
Putative virulence/resistance : Unknown
Product : replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 1963719 - 1965101 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence :
ATGAATACACCCGCCGATTCCCAGCTCGAGTACCTGCGCGTTCCTCCCCATTCCATCGAGGCTGAACAGTCGGTCCTGGG
CGGCCTGCTGCTGGACAACTCAGCCTGGGACCGCATCGCCGACGTGCTGGTGGAAGAAGACTTCTATCGCCACGACCATC
GCCTGATCTGGCACCACATCGCCCGTCTCATCGGGCTGGCGCGTCCGGCCGACGTGATCACGGTCAACGAGTCCCTGATC
AGCGCGGGCAAGGCCGAAGACGCCGGCGGCCTGGCCTACCTGAACGCGTTGGCGCACAACACGCCGTCCGCCGCCAACAT
CCGGCGCTACGGCGAAATCGTGCGCGAGCGCGCCATGTTGCGCAAGCTGGTGACGATCGCCGACGAGATTTCGTCGGCCG
CCCTGAATCCGCAGGGCAAGGAAGCCCGCCAGTTGCTGGACGAGGCCGAGTCCAAGGTGTTCAAGATCGCCCAGGAAGGC
GCGCGCGGCGCCGCCGGCTTCCAGGAGATCCAGCCTCTGCTCACGCAGGTGGTCGAGCGCATCGACGAGCTCTATCACCG
CGAAGGCAGTTCCGACGTGACCGGCGTGCCTACCGGTTTCACCGACCTGGACAAGATGACGTCCGGCATGCAGGGCGGCG
ACCTGATCATCGTGGCCGGCCGTCCGTCCATGGGCAAGACCTCGTTCTCCATGAACATCGGCGAACACGTGGCCATCGAA
CAGGGTCTGCCAGTGGCTGTGTTTTCCATGGAAATGGGCGCCGTGCAATTGGCGATGCGTATGCTGGGTTCGGTGGGCCT
GCTGGACCAGCACCGCATGCGTACCGGCAAGCTGATCGCCGACGATTGGCCGCGCGTGACGCACGCGGTGCAGCTGATGC
AGGACGCCCAGGTTTACATCGACGAAACGCCCGCGCTCAGCCCGATGGAAGTGCGCGCGCGCACGCGCCGCCTGGCGCGC
CAGTGCGGCCAGCTGGGCCTGATCATCATCGACTACCTGCAGCTTATGTCGGGGAACGGCTCGGGCGAAAACCGCGCCAC
CGAAGTGTCGGAAATCAGCCGTTCGCTCAAGGGCCTGGCCAAGGAACTCAACTGCCCGCTGATCGCGCTGTCGCAGTTGA
ACCGAAGCCTGGAACAGCGCCCCAACAAGCGTCCCGTGATGAGCGATCTGCGCGAATCCGGCGCCATCGAACAGGACGCC
GACGTGATCCTGTTCATCTACCGCGACGAGGTCTATAACCCCGACTCGCCGGACAAGGGCACCGCCGAGATCATCATCGG
CAAGCAGCGTAACGGTCCCATCGGCACCGTGCGCCTTACCTTCCAGGGTTCCAGCACGCGCTTCCTGAACTTCTCCGGCG
CGCAGCCGCGCGACATGTACTGA

Protein sequence :
MNTPADSQLEYLRVPPHSIEAEQSVLGGLLLDNSAWDRIADVLVEEDFYRHDHRLIWHHIARLIGLARPADVITVNESLI
SAGKAEDAGGLAYLNALAHNTPSAANIRRYGEIVRERAMLRKLVTIADEISSAALNPQGKEARQLLDEAESKVFKIAQEG
ARGAAGFQEIQPLLTQVVERIDELYHREGSSDVTGVPTGFTDLDKMTSGMQGGDLIIVAGRPSMGKTSFSMNIGEHVAIE
QGLPVAVFSMEMGAVQLAMRMLGSVGLLDQHRMRTGKLIADDWPRVTHAVQLMQDAQVYIDETPALSPMEVRARTRRLAR
QCGQLGLIIIDYLQLMSGNGSGENRATEVSEISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGTAEIIIGKQRNGPIGTVRLTFQGSSTRFLNFSGAQPRDMY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 4e-104 52
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 6e-91 48
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 3e-87 47
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 1e-90 47
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 8e-88 46
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 4e-89 46
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 1e-83 45
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 1e-83 45
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 2e-73 44