Gene Information

Name : BATR1942_01990 (BATR1942_01990)
Accession : YP_003972286.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 416353 - 418125 bp
Length : 1773 bp
Strand : +
Note : COG0422 Thiamine biosynthesis protein ThiC

DNA sequence :
ATGCAAAACAATTCAGTACAGCAAGCTAACATTTCCATTATGTCGAGTTTTTCCGGAAGCAAAAAAGTATATGTGGAGGG
TTCTTCACCGGACATCCAAGTGCCGATGAGAGAAATCGGCTTGAGTCCGACCACCGGATCGTTCGGCGAGGAAGAAAACG
CGCCGGTTCGTGTATATGATACGAGCGGCCCTTATACTGATCCTAATCAACAGATCAATATTCATGACGGCTTGCAGCCA
CTGCGCCATAAGTGGATTTCAGGGCGCGGTGATGTGGAAGAATACGAGGGACGAGCCATTAAACCGGAAGACAACGGCTA
TAAAAAAGCAAATCAAAATGAAAGCTATCCAGGTTTAAAACGAAATCCGCTTCGGGCTAAAACGGGAAAAAATGTGACTC
AAATGCATTATGCGAAAAAAGGCATCATTACACCGGAAATGGAGTTTATCGCGATTCGTGAGCATGTGTCTCCGGAATTT
GTGAGAGATGAAGTAGCCAGCGGACGTGCGATCATTCCTTCCAATGTGAATCACCCTGAAAGCGAGCCGATGATTATCGG
GCGGAATTTCCATGTGAAAATCAATGCGAACATCGGGAATTCTGCGGTCACTTCGTCAATTGAAGAAGAAGTCGAAAAGA
TGACATGGGCGATTCGCTGGGGAGCGGATACGATGATGGATCTTTCTACCGGGAAGGATATTCACACGACTCGTGAATGG
ATCATCCGCAATTGCCCGGTGCCGGTGGGAACAGTGCCGATTTATCAGGCTCTTGAGAAGGTGAATGGGGTTGCTGAGGA
TTTAACGTGGGAAGTGTATCGCGACACATTGATTGAACAGGCGGAACAAGGCGTTGATTACTTTACCATCCATGCGGGAG
TCTTGCTTCGGTATGTGCCTTTAACCGCAAAGCGTACAACGGGTATAGTATCACGCGGAGGGGCAATTATGGCGCAATGG
TGTCTGGCCCATCATCAAGAAAGTTTCTTATACACTCATTTTGAAGAGATTTGTGAAATTATGAAGGCTTACGATATTGC
TTTCTCCCTCGGTGACGGTCTGCGTCCTGGTTCGATTGCGGATGCGAATGATGAGGCGCAGTTTGCGGAACTGGAGACGC
TTGGAGAACTGACGCAAATTGCGTGGAAGCATGATGTACAGGTGATGATTGAAGGGCCTGGCCATGTGCCGATGCATAAA
ATCAAAGAGAACGTCGATAAACAAATGGAAATCTGTAAAGAAGCGCCTTTTTACACGTTAGGGCCGCTGACGACGGATAT
TGCACCGGGCTATGACCACATTACATCAGCGATCGGAGCGGCGATGATCGGCTGGTACGGGACTGCGATGCTGTGCTATG
TCACGCCGAAAGAGCATTTGGGGCTGCCAAATCGCGATGATGTGAGAGAAGGGGTAATTACTTATAAAATTGCAGCTCAT
GCGGCTGATCTTGCAAAAGGGCATCCGGGAGCACAAATACGCGATGACGCCCTTTCAAAAGCGCGCTTTGAATTCCGCTG
GCGTGATCAGTTTAACCTTTCCCTCGATCCTGAAAGGGCGATTGAATATCATGATGAAACATTGCCTGCGGAAGGAGCAA
AGACGGCTCACTTCTGTTCGATGTGCGGACCGAAGTTTTGCAGTATGAGAATTTCACAGGATATTCGGGATTATGCGAAG
GAAAATAATCTTAATGAATCTGAAGCTATAGATGAAGGATTAAAAGAAAAGGCAAAAGAGTTCGTAGAGACGGGAAGCAA
TTTATATCAATAA

Protein sequence :
MQNNSVQQANISIMSSFSGSKKVYVEGSSPDIQVPMREIGLSPTTGSFGEEENAPVRVYDTSGPYTDPNQQINIHDGLQP
LRHKWISGRGDVEEYEGRAIKPEDNGYKKANQNESYPGLKRNPLRAKTGKNVTQMHYAKKGIITPEMEFIAIREHVSPEF
VRDEVASGRAIIPSNVNHPESEPMIIGRNFHVKINANIGNSAVTSSIEEEVEKMTWAIRWGADTMMDLSTGKDIHTTREW
IIRNCPVPVGTVPIYQALEKVNGVAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRTTGIVSRGGAIMAQW
CLAHHQESFLYTHFEEICEIMKAYDIAFSLGDGLRPGSIADANDEAQFAELETLGELTQIAWKHDVQVMIEGPGHVPMHK
IKENVDKQMEICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNRDDVREGVITYKIAAH
AADLAKGHPGAQIRDDALSKARFEFRWRDQFNLSLDPERAIEYHDETLPAEGAKTAHFCSMCGPKFCSMRISQDIRDYAK
ENNLNESEAIDEGLKEKAKEFVETGSNLYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 71
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 71
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 66