|
Name : BATR1942_18125 (BATR1942_18125) Accession : YP_003975473.1 Strain : Bacillus atrophaeus 1942 Genome accession: NC_014639 Putative virulence/resistance : Unknown Product : resolvase domain-containing protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 3536937 - 3538625 bp Length : 1689 bp Strand : - Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs DNA sequence : ATGTCGAACTATGCGAGACAGCTCGACGACCAGCTTGACCAATTCAACCGAACTGAAACACAGAAAAGAGCCGCTATCTA TGCCCGAGTCTCCACATTGGAACAGGCTGAAGAAGGCTACAGTATTGATGAACAGGTCCGTGTGCTAAGAGAAATGTGCG AACGAGAAGGTTATGTTGTTCATAAAGAATACGTGGACCGAGGGAAAAGCGGAAAGAACATCAAAGGCCGACCTGCCTTA CAACAATTACTGCATGATGCCAAGGGTAAAGACTTTAACTTGGTGCTTGTTTGGAAGGTGAACCGCTTTTCTCGTAAGAC AAAGGATTTACTAAATATTGTCGAAGAACTGGAAATGAGAAATATTGTTTTTCGTTCATTTACTGAACGCTACGAAACGG AAACTCCAGCAGGGAAAATGCAGTTTAGGATGTTGGCAGTCATTGCTGAATTTGAAAGAGATAATATTGCTCAAAACGTA AAAATGGGGATGTTGGCAAGAGCCAAAGAAGGGTCATGGAATGGTGGTCAGGTGCTTGGGTATGATGTCATAAGCGTTCC AGGAGAAAACCGTAAGAGAAAACTCTCAACACTTGTTGTTAATCCAACAGAAGCGCAAACTGTTCGAAAGGTATTTGACC TTTACGTTGAGGGGAATGGCTACAAATCCATCGCAAACAAGCTCAACAAAGAAGGACATCGTACAAAGAAGAATAAGGAT TTCTCCATCAACGGGGTAAAAACGATTCTAAGCAATCCCCTTTATGCAGGATTTATTCGCTATAATGTCCGGAGAGATTG GAATGAGAAGAGAAGAAACAATATCAATCCTCACCCTGTGATTGAAAAGGGGCATCACGAAGCTATCATTTCAGAAGAAA CATGGGAAAAAGCAAAAAATATCATGGCGAGCAGAAGCGGCAAGCCTAATCGAATACATGACGGTGAGTTCCCACTCACT GGTATCATGAAGTGCCCTGCATGTGGGGCAGGGATGGTGATTGGGAGGACGACGAATACCCTCAAAGACGGAACAAAAAA GGTTCTGGAGTATTATGTATGTGGAGCCTGGAAGAACAAAGGTACAGCGGTTTGTCGTTCGAATGGAGTAAGGACAGATT ATGCAGACCCTTATGTACTTGAAAAGTTATCAACCATAGCAACAAGTGATGTTCTTATAGAGCAAATTGTTGAACGGATT AATAATAAGAAGGAAAGAGATTCTTCTCCACTTCAACACGAATATGAGACCTTGAAAAAGGCACTAGAATCCAATCAACA AAAGAAAGAGAAGGTCCTAGGTTTGTACGAAGATGATTTGATTCAAAAAGCAGACCTTGTGCAGCGGTTATCCACTTTGA ATGAAGAAAAGGAACGACTTGAAGAGAGACTATCTCCAATTGAACTGCAGATAGGGCAAGGTGGTACACAACTCATAAAC TTTTCAATGGTCAAACAGGTCATGCAGAACTTCAAAAGTGCCTATCAAGAGTCATTGACTAGAGAGCAAAGGAAAAGGCT GATGCATCTGCTTATCCGTCAAATCACCATCAATGAGGACCGAAAGATTGATACGATACAAATACAACTCAATAAAGAAG TTGCAAAACACTTCACCTTTAAAGGGGGAGAGGATTCATCTATTACGGATGAGTTCTCTCCCCCTTTTTATATTTTAATC GACCTATGA Protein sequence : MSNYARQLDDQLDQFNRTETQKRAAIYARVSTLEQAEEGYSIDEQVRVLREMCEREGYVVHKEYVDRGKSGKNIKGRPAL QQLLHDAKGKDFNLVLVWKVNRFSRKTKDLLNIVEELEMRNIVFRSFTERYETETPAGKMQFRMLAVIAEFERDNIAQNV KMGMLARAKEGSWNGGQVLGYDVISVPGENRKRKLSTLVVNPTEAQTVRKVFDLYVEGNGYKSIANKLNKEGHRTKKNKD FSINGVKTILSNPLYAGFIRYNVRRDWNEKRRNNINPHPVIEKGHHEAIISEETWEKAKNIMASRSGKPNRIHDGEFPLT GIMKCPACGAGMVIGRTTNTLKDGTKKVLEYYVCGAWKNKGTAVCRSNGVRTDYADPYVLEKLSTIATSDVLIEQIVERI NNKKERDSSPLQHEYETLKKALESNQQKKEKVLGLYEDDLIQKADLVQRLSTLNEEKERLEERLSPIELQIGQGGTQLIN FSMVKQVMQNFKSAYQESLTREQRKRLMHLLIRQITINEDRKIDTIQIQLNKEVAKHFTFKGGEDSSITDEFSPPFYILI DL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccrB3 | BAB47597.1 | cassette chromosome recombinase B3 | Not tested | Type-III SCCmec | Protein | 2e-81 | 46 |
| ccrB3 | YP_005754051.1 | site-specific recombinase CcrB3 | Not tested | Type-XI SCCmec | Protein | 1e-82 | 46 |
| ccrB3 | BAB46972.1 | cassette chromosome recombinase B3 | Not tested | Type-IIIinv SCCmec | Protein | 2e-81 | 46 |
| SSP0035 | YP_300125.1 | cassette chromosome recombinase B | Not tested | SCC15305RM | Protein | 8e-79 | 44 |
