Gene Information

Name : BATR1942_15095 (BATR1942_15095)
Accession : YP_003974872.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Virulence
Product : UDP-sugar epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 2958671 - 2960467 bp
Length : 1797 bp
Strand : -
Note : COG1086 Predicted nucleoside-diphosphate sugar epimerases

DNA sequence :
ATGATTATCGCGCTGGATACTTATCTCGTCTTACTTTCAGTTATTATAGGATACCAATTTTTTGAGGATTCTTATCAATT
TTATGACTCCGGAGCATTATTGCTTACTGCGGTCAGCTTGCTTGTCAGCCACCATGTGTGTGCCATGTTGTTTCATCAAT
ATAAGCAGATGTGGAGCTATACCGGCATCGGTGAATTGATTGCCCTCCTTAAGGGAATTACGCTGTCTGCCGTAATGGCC
GGCATTGTTCAGTATGCAGTGTTTCATACGGTTTTGTTCCGCCTGCTGGCCGTGAGCTGGATGCTGCAGCTTCTTCTTAT
CGGCGGAACACGTGTGGTATCAAGGGTGTTAAAAGAACGTATGGGAAAAAAACGGAGCTCTTCGTCCCGGGCGTTAATCA
TCGGAGCGGGATCAGGAGGAACACTGATGGTCAGACAGCTGCTCCAGCAAAATGACTTTGACATCACGCCTGTCGCCTTT
ATAGATGATGATCAGACGAAGCACAAGCTTGAGATTATGGGAGTACCCGTCATCGGGGGAAAAGAAAGCATCATGCCGGC
AGTGCAAAAATTAAGAATTAATAACATCATTATCGCGATTCCGTCTCTTCGGACACATGAACTTCAGATTTTATATAAAG
AATGTGTACGTACCGGGGTGAGCATCAAGATCATGCCTGATTTCGATGAAATGCTGCTAGGCACGCGGACGGCCAGCCAA
ATCAGAGATGTAAAGGCTGAGGATTTGCTCGGCAGAAAGCCGGTAACGCTTGATACAAGCGAGATTTCTAACAGTGTGAA
AGGAAAAACAATTGTCGTCACAGGGGCGGGCGGTTCCATTGGCTCGGAAATCTGCCGGCAGATCAGCGATTTTCAGCCAA
AAAATGTGGTGCTTCTCGGGCACGGGGAAAACAGTATTCATTCAACCCATTCAGAGCTGATCGGACGCTTCGGTAAACAT
GTCACTTTTCATACGGAGATCGCTGATGTGCAGGATCGGGACAAAATGTTTACAGTGATGAAAAAATATGAACCGCATGT
AGTGTACCATGCCGCGGCCCATAAGCATGTGCCGTTAATGGAGCACAATCCTGAAGAGGCTGTAAAAAATAATATTATCG
GAACACGAAATGTGGCAGAAGCCGCCGATATGTGCGGAACAGAGACGTTTGTGCTGATTTCATCGGATAAGGCGGTTAAT
CCCGCCAATGTGATGGGGGCGACAAAACGTTTCGCGGAAATGATTATAATGAACCTCGGGAAAGTCAGCCGGACAAAATT
TGTCGCCGTTCGCTTCGGCAACGTGCTTGGGAGCCGCGGGAGCGTCATTCCCGTTTTCAAAAAGCAAATTGAAAAGGGCG
GGCCCGTCACAGTGACACACCCGGCGATGACACGCTATTTTATGACCATCCCGGAGGCTTCGAAGCTGGTGATACAAGCA
GGGGCGCTCGCAAAAGGACGGCAGATTTTTGTGCTTGATATGGGTGAGCCTGTCAAAATTGTGGATCTTGCCAAAAACCT
GATTCATTTATCAGGCTATACAACCGAACAAATTCCCATTGAGTTCACCGGTATCCGTCCGGGCGAAAAAATGTACGAGG
AATTGCTGAATCAGAATGAAGTTCATGCGGAGCAGGTTTTCCCGAAAATTCATATCGGCAAAGCGGTTGACGGTGATTGG
CCAATGTTAATGGAGTTTATGGAAGATTTCAAGGACCTCTCGGAAGCAGAACTGAGAAAGAGGCTGTTCGCGGCGATTGG
ATCAACGAAAGAAATGGCGGCCGCGGGCGCTCATTAG

Protein sequence :
MIIALDTYLVLLSVIIGYQFFEDSYQFYDSGALLLTAVSLLVSHHVCAMLFHQYKQMWSYTGIGELIALLKGITLSAVMA
GIVQYAVFHTVLFRLLAVSWMLQLLLIGGTRVVSRVLKERMGKKRSSSSRALIIGAGSGGTLMVRQLLQQNDFDITPVAF
IDDDQTKHKLEIMGVPVIGGKESIMPAVQKLRINNIIIAIPSLRTHELQILYKECVRTGVSIKIMPDFDEMLLGTRTASQ
IRDVKAEDLLGRKPVTLDTSEISNSVKGKTIVVTGAGGSIGSEICRQISDFQPKNVVLLGHGENSIHSTHSELIGRFGKH
VTFHTEIADVQDRDKMFTVMKKYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTRNVAEAADMCGTETFVLISSDKAVN
PANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGSVIPVFKKQIEKGGPVTVTHPAMTRYFMTIPEASKLVIQA
GALAKGRQIFVLDMGEPVKIVDLAKNLIHLSGYTTEQIPIEFTGIRPGEKMYEELLNQNEVHAEQVFPKIHIGKAVDGDW
PMLMEFMEDFKDLSEAELRKRLFAAIGSTKEMAAAGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 1e-121 54
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-123 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BATR1942_15095 YP_003974872.1 UDP-sugar epimerase VFG1300 Protein 1e-122 53
BATR1942_15095 YP_003974872.1 UDP-sugar epimerase VFG0029 Protein 6e-69 41