Gene Information

Name : BATR1942_13190 (BATR1942_13190)
Accession : YP_003974496.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2577198 - 2577950 bp
Length : 753 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGTACCCGGTTGACATTGAAAACGTAACCGTCGCTTATCATAAAAAGCCTGTATTGCAGGACATCTCGATGCAGGTGCC
GGAAGGAAAATTGATCGGTATCATCGGACCGAACGGAGCAGGAAAATCTACTTTAATCAAAGCGATTCTGGGACTCATCC
CCCGCGCATCCGGCGACGTCTCGATTTACGGAAAAACATACAGCAAGCAGCGGAAAAAAATTGGATACGTTCCCCAAAGA
GGTTCTGTTGATTGGGATTTTCCAACAAACGCACTTGATGTCGTCTTAATGGGGAGATATGGCCATATCGGCTGGCTGAA
AAGGCCGAAAAAATCGGATGTCGGGTTAGCTAGGATCTGTTTGGACAAAGTCGGCATGCTGGACTATGCCGACAGACAAA
TCAGCCAGCTATCAGGCGGGCAGCAGCAGCGGGTCTTTCTTGCCAGAGCATTGTGCCAAGATGCCGATATCTATTTTATG
GATGAGCCGTTTGTCGGCGTTGATGCGGCAACGGAACGGGCAATTATTACCCTGCTGACTGAATTAAAGCAAAAGGGGAA
GACCGTTCTTGTCGTTCATCATGATTTGCAGACGGCTGAAGATTATTTTGACTGGATTTTGCTGCTTAATCTCAGAAAAA
TTGCGTTCGGGCCAACGGAACAAGTGTTTACCATAGATAATTTGCAAAAAGCCTATGGAGGAAGGCTCGCCTTTCTCAAA
GATAAAGTCATGGTTGAAGGGAGTCAGGGGTGA

Protein sequence : 
MYPVDIENVTVAYHKKPVLQDISMQVPEGKLIGIIGPNGAGKSTLIKAILGLIPRASGDVSIYGKTYSKQRKKIGYVPQR
GSVDWDFPTNALDVVLMGRYGHIGWLKRPKKSDVGLARICLDKVGMLDYADRQISQLSGGQQQRVFLARALCQDADIYFM
DEPFVGVDAATERAIITLLTELKQKGKTVLVVHHDLQTAEDYFDWILLLNLRKIAFGPTEQVFTIDNLQKAYGGRLAFLK
DKVMVEGSQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 9e-47 48
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 7e-47 48
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 9e-51 46
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-49 46
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-49 46
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 1e-50 46
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-51 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BATR1942_13190 YP_003974496.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 1e-73 62
BATR1942_13190 YP_003974496.1 manganese ABC transporter ATP-binding protein BAC0350 Protein 6e-51 46
BATR1942_13190 YP_003974496.1 manganese ABC transporter ATP-binding protein BAC0440 Protein 2e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BATR1942_13190 YP_003974496.1 manganese ABC transporter ATP-binding protein VFG0526 Protein 5e-51 46