Gene Information

Name : BATR1942_12980 (BATR1942_12980)
Accession : YP_003974454.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2541602 - 2542297 bp
Length : 696 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGATAGATGTTCAGCATATAGACCATTCATTTAAAATCGGAAAAAAAGGCAGAGAGAATGAGGTCCCTGTCTTAAAGGA
CGTTTCGTTGACGGTGTCTAAAGGAGAAATCGCCTGTATCGTCGGACGGAGCGGATCAGGGAAATCGACGCTCTTGAATC
TCATTTCGGGGTACATCTCGCCAACTAAAGGGAGAATCGTTATTGACGGCACAGATGTAACCGGCTTTAACGAAAAGGAA
TGGGCTAATTTCCGTCTTGAGCATTTTGGTTTTATCTTTCAGAGCTTTCAGCTTATTGGGAGCCTGACGACGTACGAAAA
TGTGGAAATGCCGCTGGCGCTCAAAGGCGTAAAGCCGTCTGAGCGGAAGCAGAAAGTACAGGACATGCTGAAGCGCGTCG
GTCTCGAAAACCATGCCAGCCACTATCCGAATGAACTGTCCGGCGGCCAGCAGCAGCGTGTCAGCATCGCGAGAGCGTTA
ATTTTGAATCCGTCGATCATTTTAGCCGATGAGCCGACGGGAAGCCTTGATTCAGAAACAGAGCATGAAGTGCTTGAATT
TATTCAGCAGCTCAACCGCGAGCGCGGGATTACATTTGTGATCATCACCCATGACGATGAGGTTGCATCCATCGCCCATT
CAAAATTCCAGCTGCATGACGGTGTGTTAAAAGGGGGAGTTACCGTTGAGGTTTAA

Protein sequence : 
MIDVQHIDHSFKIGKKGRENEVPVLKDVSLTVSKGEIACIVGRSGSGKSTLLNLISGYISPTKGRIVIDGTDVTGFNEKE
WANFRLEHFGFIFQSFQLIGSLTTYENVEMPLALKGVKPSERKQKVQDMLKRVGLENHASHYPNELSGGQQQRVSIARAL
ILNPSIILADEPTGSLDSETEHEVLEFIQQLNRERGITFVIITHDDEVASIAHSKFQLHDGVLKGGVTVEV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-33 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BATR1942_12980 YP_003974454.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-41 45
BATR1942_12980 YP_003974454.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-36 44
BATR1942_12980 YP_003974454.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-42 43
BATR1942_12980 YP_003974454.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-36 42