Gene Information

Name : BATR1942_00105 (BATR1942_00105)
Accession : YP_003971912.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Unknown
Product : cell wall hydrolase; mobile element region
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0791
EC number : -
Position : 15327 - 16289 bp
Length : 963 bp
Strand : +
Note : COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

DNA sequence :
ATGGTATTCTCAGCCCCTTTTATCTTCTTTTTTGTTTTATCTATAGTAGTGGTTATGACGATTTCAAGGGAAAATCAAGT
CGGAGACGATTATATAGGCGGCGGGGATGGCGAATATGAAACGGTTGGTATTGCACCGGAAGTCGAACGATTTAGGGCTG
TATTTGAAAAGTACGCCCGTCAGGAAGGTGTTTTTGACCAAGTGAATATTATTATGGCGCTCACCATGCAAGAAAGCGGT
GGGCGTTCTTTAGATATAATGCAAAGTTCCGAAAGTATCGGCTTACCTCCCAACTCCATAACTGACCCAGAATACTCGAT
TGAAGTCGGCATTAAATATTTTAAGAAGGTTTTTAAACAGGCTGGCGGGGATGTTCGTTTAACCATACAGGCTTACAACT
TTGGTTCTGGATTTATAGACTATGTGAAAAAGAATGGCGGGAAATTTACAAAGAAATTGGCACTTGATTTTAGCCGATTG
CAAGCCTTTAAAATGGGCTGGAAAAGCTATGGTGATCCAAGCTATGTAGATCACGTCATGAGATATGTAAAGGGTTCTGA
TAAAAATGTAGCGCCTGTGAATGGCTCTATGGACTTTTATGAAACGGTCATGAAAGAAGCTTTGAAGTATGAAGGGCAAC
CGTATGCCTGGGGTGGTTCAAATCCGAAAACTGGATTTGATTGTTCGGGCCTTGTTCAGTGGTCTTTCGCCAAAGCCGGA
ATTACTCTTCCAAGAACAGCACAAGAACAACATGGGGCAACAAAGAAAATAAGTGAAAAAGAAGCGACTGCGGGTGACCT
TGTGTTCTTTGGGGGCACATATGAAGGAAAAGCCATTACTCACGTTGGCATCTATGTAGGCAATGGCAGAATGTTTAATT
CAAATGACAGTGGAATCGAATATTCTGATTTGAAATCAGGTTACTGGAGAGAGCACCTTGTATCTTTTGGGCGCATTAAA
TAA

Protein sequence :
MVFSAPFIFFFVLSIVVVMTISRENQVGDDYIGGGDGEYETVGIAPEVERFRAVFEKYARQEGVFDQVNIIMALTMQESG
GRSLDIMQSSESIGLPPNSITDPEYSIEVGIKYFKKVFKQAGGDVRLTIQAYNFGSGFIDYVKKNGGKFTKKLALDFSRL
QAFKMGWKSYGDPSYVDHVMRYVKGSDKNVAPVNGSMDFYETVMKEALKYEGQPYAWGGSNPKTGFDCSGLVQWSFAKAG
ITLPRTAQEQHGATKKISEKEATAGDLVFFGGTYEGKAITHVGIYVGNGRMFNSNDSGIEYSDLKSGYWREHLVSFGRIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0924 YP_001198290.1 hypothetical protein Not tested 89K Protein 4e-53 46
SSU98_0930 YP_001200488.1 hypothetical protein Not tested 89K Protein 4e-53 46
smi_1695 YP_003446797.1 hypothetical protein Not tested The aminoglycoside resistance gene cluster Protein 2e-47 44