Gene Information

Name : xerD (BATR1942_10035)
Accession : YP_003973871.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Unknown
Product : site-specific tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1969580 - 1970470 bp
Length : 891 bp
Strand : -
Note : COG4974 Site-specific recombinase XerD

DNA sequence :
GTGAAGGATCAATTGAAGGATTTCATCCACTATGTAATGGTTGAAAGAGGGCTTTCTCAAAATACGATGATGTCATATGA
GCGTGACTTGAAAAGCTATTCTCTATTTTTAACGGAAACCCTTCAGGTCACCTCTTGGAATGAAGTGACACGGATTCATA
TTATTCAATACTTAAAGCATTTGAAGGATTCGGGAAAGTCCGGAAAGACATCGGCGCGGCACTTGGCGTCCATTCGTTCT
TTTCATCAATTCCTTCTTAGAGAAAAGGTGACGGACAAAGACCCTTCCGTACATATAGAAACACAGAAAACAGAGCGGAC
GCTGCCGAAGGTCCTGTCGCTGAAAGAAGTTGAACTGCTGCTGGACACGCCAAAGCTGACCAGTCCGTTCGGCTATCGGG
ACAAAGCGATGCTTGAACTGCTGTATGCCACGGGAATACGGGTCAGCGAAATGATTGATTTGAAGACTTCGGATGTGCAT
CTGTCAATGGGATTTGTCCGCTGTTTCGGAAAAGGGAGAAAAGAGCGGATCGTGCCGATTGGCGAAACCGCGGCGCACGC
CATTGAAGAATATTTGGCAAAAGCTCGTGGAAAACTGCTGAAGAAAAATGTGTCAGACGCTCTTTTTCTGAATCATCACG
GTAAACAAATCAGCCGTCAGGGATTTTGGAAAAACCTTAAAAAAATCGCGCTGGAAGCCGGAATAAAAAAAGAGCTGACA
CCGCATACCCTCAGACACTCCTTTGCAACTCATTTGCTGGAAAACGGAGCAGACCTAAGAGCGGTGCAGGAGATGCTTGG
GCATGCGGATATCTCCACAACCCAGATTTATACGCATGTAACAAAAACGAGGCTGAAGGATGTGTACAAGCAGTATCATC
CGCGTGCCTAG

Protein sequence :
MKDQLKDFIHYVMVERGLSQNTMMSYERDLKSYSLFLTETLQVTSWNEVTRIHIIQYLKHLKDSGKSGKTSARHLASIRS
FHQFLLREKVTDKDPSVHIETQKTERTLPKVLSLKEVELLLDTPKLTSPFGYRDKAMLELLYATGIRVSEMIDLKTSDVH
LSMGFVRCFGKGRKERIVPIGETAAHAIEEYLAKARGKLLKKNVSDALFLNHHGKQISRQGFWKNLKKIALEAGIKKELT
PHTLRHSFATHLLENGADLRAVQEMLGHADISTTQIYTHVTKTRLKDVYKQYHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-50 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-50 44