Gene Information

Name : BATR1942_06450 (BATR1942_06450)
Accession : YP_003973175.1
Strain : Bacillus atrophaeus 1942
Genome accession: NC_014639
Putative virulence/resistance : Resistance
Product : small multidrug efflux transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 1325818 - 1326165 bp
Length : 348 bp
Strand : -
Note : COG2076 Membrane transporters of cations and cationic drugs

DNA sequence :
ATGAAAGGAATGATTTTTTTAGCTGCGGCAATTATCACAGAGGTATTTGGCAGCACAATGCTGAAACTGTCTGAAGGCTT
TACTCAAATCGGACCCAGCATCGGAGTAATAGCAGGATTTGCATCCGCCTTCACTTTTTTAAGCATGTCACTTAAAACGA
TTGACTTATCTTCGGCATACGCCACATGGTCAGGCATCGGTACAGCGCTGACCGCTATCATCGGTTATTTGCTTTTTGGC
GAAACCATCAGCATGAAAGGGATATTTGGCCTTACCCTTGTGATAGCCGGGGTTGTTCTGCTTAACAAGTCAAAATCGGC
AAAAAAAGAACAAACGGTCTTACACTGA

Protein sequence :
MKGMIFLAAAIITEVFGSTMLKLSEGFTQIGPSIGVIAGFASAFTFLSMSLKTIDLSSAYATWSGIGTALTAIIGYLLFG
ETISMKGIFGLTLVIAGVVLLNKSKSAKKEQTVLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 5e-17 46
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 5e-17 46
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 7e-17 46
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 5e-17 46
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 5e-17 46
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 5e-17 46
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 5e-17 46
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 5e-17 46
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 5e-17 46
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 5e-17 46
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 5e-17 46
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 7e-17 46
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 5e-17 46
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 5e-17 46
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 7e-17 46
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 5e-17 46
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 7e-17 46
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 5e-17 46
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 5e-17 46
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 7e-17 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0140 Protein 3e-35 80
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0139 Protein 3e-17 51
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0322 Protein 1e-18 48
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0323 Protein 2e-17 46
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0321 Protein 1e-15 45
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0324 Protein 2e-17 44
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0329 Protein 1e-11 44
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0002 Protein 7e-15 44
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter NC_010410.6003348.p0 Protein 7e-15 44
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0477 Protein 1e-10 43
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0326 Protein 1e-11 42
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0325 Protein 9e-12 42
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0192 Protein 3e-16 42
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0377 Protein 1e-14 41
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter CP004022.1.gene1549. Protein 3e-15 41
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter CP001138.1.gene1489. Protein 3e-16 41
BATR1942_06450 YP_003973175.1 small multidrug efflux transporter BAC0216 Protein 9e-10 41