Gene Information

Name : BBPR_0840 (BBPR_0840)
Accession : YP_003970957.1
Strain : Bifidobacterium bifidum PRL2010
Genome accession: NC_014638
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.1
Position : 1033265 - 1034833 bp
Length : 1569 bp
Strand : +
Note : -

DNA sequence :
TTGGAGAGCTTCGCGACGCGGCTGAGAACCGCCATGAACGCCCGTCACCTCAGACAGGTCGACATCGTGCGTGCCGCCCA
GGCGTCAGGTGTCAAACTCGGCAAAAGCCACATCAGCCAATATGTCAGCGGCAAGACGACGCCCCGCGCGGATACGCTCA
GGTTCCTCGCCGATACACTGCAGGTCGACGAGCAATGGCTGCTCGGCCATGATCGCGGACGGCCCGGCATGCCGGCGCAG
CCGAAACGGGTGCCGGACAATCCCGGCGGCCGGGCCGACGCGCCACGCACGCCATCATCCCAAGCGCCCGCACCCCAGAC
AACGTCACCATCACACGAACCGGAAGGAACACCCATGCGCCACTTCAACAAATCCACCAAACTTGACAACGTGCTGTACG
ACGTGCGCGGACCGGTCGTCGACGAGGCCGCCCGCATGGAGCAGTCCGGCATGCACGTGCTCAAGCTCAACATCGGCAAC
CCCGCGCCGTTCGGCTTCCGCACACCGGACGAGGTCGTATACGACATGTCCCGGCAGCTCAGCGACACGGAAGGCTACTC
CGCGTCCAAGGGCCTGTTCTCGGCGCGCAAGGCGATCATGCAGTACGCGCAGCTCAAGAACCTGCCCAATGTCGGCATCG
AAGACATCTACACCGGCAACGGCGTCAGCGAGCTGATCAACCTGTCGTTGTCCGCCCTGCTTGACAACGGCGACGAGGTG
CTGGTGCCCAGCCCCGACTACCCGCTGTGGACCGCCTGCGTCAACCTGGCCGGCGGCACCGCCGTGCACTACGTGTGCGA
CGAGGAATCCGAATGGTACCCGGACATCGATGACATGCGCAGCAAGATCACCGACCGCACGGTGGCGATCGTCCTGATCA
ACCCGAACAACCCGACCGGCGCCCTCTACCCGAAGGAGGTGCTGCAGCAGATCGTCGATCTGGCCCGCGAACACCAGCTG
ATGATCTTCTCCGACGAGATCTACGACCGTCTGGTGATGGACGGACTCCAGCACGTCTCGATAGCGTCCATGGCCCCGGA
CCTGTTCTGTGTCACGTTCTCCGGCCTGTCGAAGTCGCACATGATCGCGGGCTACCGCATCGGATGGATGGTGCTCAGCG
GCAACAAGTCCATCGCGAAGGACTATGTCGAGGGCATCAACATGCTCACCAACATGCGCATCTGCTCGAACGTGCCCGCC
CAGTCGATCGTGCAGACCGCTCTCGGCGGCCACCAGAGCGTCAACGACTACATCGTGCCCGGCGGCCGTCTGTACGAGCA
GCGCGAATACATCTACAACGCGTTGAACTCGATTCCCGGCGTCACCGCGGTCAAGCCGAAGGCCGCGTTCTACATCTTCC
CCAAGCTCGACGTGAAGAAGTTCAACATCACTGATGATGAGCAGTTCGCGCTTGACCTGCTGCATGACAAGCGCATCCTC
ATCACGCGCGGCGGCGGGTTCAACTGGCATGAGCCGGACCACTTCCGCATCGTCTACCTGCCGCGCATCGAAGTGCTCAA
GGACGCGACGGAAAAGCTCACCGACTTCCTCAGCTGCTACCGGCAGTAG

Protein sequence :
MESFATRLRTAMNARHLRQVDIVRAAQASGVKLGKSHISQYVSGKTTPRADTLRFLADTLQVDEQWLLGHDRGRPGMPAQ
PKRVPDNPGGRADAPRTPSSQAPAPQTTSPSHEPEGTPMRHFNKSTKLDNVLYDVRGPVVDEAARMEQSGMHVLKLNIGN
PAPFGFRTPDEVVYDMSRQLSDTEGYSASKGLFSARKAIMQYAQLKNLPNVGIEDIYTGNGVSELINLSLSALLDNGDEV
LVPSPDYPLWTACVNLAGGTAVHYVCDEESEWYPDIDDMRSKITDRTVAIVLINPNNPTGALYPKEVLQQIVDLAREHQL
MIFSDEIYDRLVMDGLQHVSIASMAPDLFCVTFSGLSKSHMIAGYRIGWMVLSGNKSIAKDYVEGINMLTNMRICSNVPA
QSIVQTALGGHQSVNDYIVPGGRLYEQREYIYNALNSIPGVTAVKPKAAFYIFPKLDVKKFNITDDEQFALDLLHDKRIL
ITRGGGFNWHEPDHFRIVYLPRIEVLKDATEKLTDFLSCYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-117 55
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-117 55
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-117 55
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-117 55