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Name : lysS (BBPR_1489) Accession : YP_003971557.1 Strain : Bifidobacterium bifidum PRL2010 Genome accession: NC_014638 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 1751363 - 1752964 bp Length : 1602 bp Strand : - Note : - DNA sequence : ATGCTGCTGCGACAGGACGCAGCCATCCGCGACCGCATCGGCGCCGGCGCAACTTTGGACGAGGCCGTCGATCCCTCCAA CAAGGAGTTCGGCCCGCTCGCGCACCCCGAGCAGGTGCAGATGCGCGTCGCCAAGCGCGCGATGATGCTTGAGGCCGGCA TGCAGCCCTACCCGGTGCACCTCGACGTGACCGACACCATCGAGGCCGTGCGCGCCAAGTATGACGGCAAGCTTGAAGCC GGTCAGGAGACCGAGGACGTGGTCGGCATCGCCGGGCGCGTCCTGTTTCTGCGCAACGGCGGCGGCCTGTGCTTCGTGCA GCTGTCGGCCGGCGACGGCACGAAGATCCAGGGCATGATCTCCAAGAAGGAGATCGGCGCTGACTCGCTCAAGCAGTTCA AGCAGCTCGTGGACCTCGGCGACCACCTGTACCTGCGTGGCCGCGTGATCGCGTCCAAGACCGGCGAGCTATCTGTGTTC GCCACCGAATGGGCCATCGCGTCCAAGGCGCTGCAGCCGCTGCCCGCCCTGCACAAGGACCTGAACGACGACACGCGCAC GCGCAAGCCGTACATCGGCATGATCGCCGATGAGAAGGTGCGCAACATGGTGCGCAACCGGTCCAAGGCCGTCGCCTCGC TGCGCCGCACGTTCGATGACCACGACTTCCTCGAGGTCGAGACGCCGATGCTGCAGACTATCCACGGCGGTGCCGCCGCC CGTCCGTTCACCACGCACATGAACGCCTTCGACTTGGATCTTTATCTGCGCATCGCGCCGGAACTGTTCCTCAAGCGCTG CCTCGTGGGCGGCATCGACCGCGTGTTCGAGATCAACCGCGACTTCCGCAACGAGGGCGTCGACGCCACGCACGCCCCCG AGTTCACGATGGTCGAGGCCTACCAGGCGTACGGCACCTACGACACCATCGGCCAGCTGGTCAAGGAGCTCGTGCAGAAG ACCGCGATGGACGTGTTCGGCTCCCATAAGGTCACGCTGCTCGACGGCACCGAATACGATTTCGGCGGCGACTGGAAGAC CATCAGCATGTATGATTCGCTCTCCGAGGCGCTCGGCGAAGAGATCGTGCCGAACGGCGGGCCGGACAACCCCGGCACTT CCGTGGAGCATCTGGGCGAGATCGCCGACAAGCTCGGCGTGGAGCGTGACGACGTTGAGAACCACGGCAAGCTCGTCGAG CACCTGTGGGAGCACTTCTACGAGGACAAGCTATACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAGACCTCCCCGCT GGTCAAGGGCCACCGCAACAAGGCCGGCGTGGTGGAGAAGTGGGACCTCTACGTGCGCGGCTTCGAGCTGGCCACCGGCT ACTCCGAGCTCAACGACCCGATCGTGCAGCGCGAGCGTTTCGTGGCTCAGGCCAAGGATGCGCTGGCCGGTGACGAGGAG GCCTGCGACATCGACGAGGACTTCTTGGAGGCCCTCGGCGTGGGCATGCCCCCGGCGGGCGGCATGGGCATGGGCATCGA CCGACTGCTCATCGCCCTGACCGGTGCCACGATCCGCGAGACCATCACCTTCCCGCTGGTCAAGCCGCTGGCGTTGCAGT AA Protein sequence : MLLRQDAAIRDRIGAGATLDEAVDPSNKEFGPLAHPEQVQMRVAKRAMMLEAGMQPYPVHLDVTDTIEAVRAKYDGKLEA GQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLYLRGRVIASKTGELSVF ATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTIHGGAAA RPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQK TAMDVFGSHKVTLLDGTEYDFGGDWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVE HLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEE ACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPLALQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 4e-135 | 56 |
