Gene Information

Name : lysS (BBPR_1489)
Accession : YP_003971557.1
Strain : Bifidobacterium bifidum PRL2010
Genome accession: NC_014638
Putative virulence/resistance : Unknown
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : 6.1.1.6
Position : 1751363 - 1752964 bp
Length : 1602 bp
Strand : -
Note : -

DNA sequence :
ATGCTGCTGCGACAGGACGCAGCCATCCGCGACCGCATCGGCGCCGGCGCAACTTTGGACGAGGCCGTCGATCCCTCCAA
CAAGGAGTTCGGCCCGCTCGCGCACCCCGAGCAGGTGCAGATGCGCGTCGCCAAGCGCGCGATGATGCTTGAGGCCGGCA
TGCAGCCCTACCCGGTGCACCTCGACGTGACCGACACCATCGAGGCCGTGCGCGCCAAGTATGACGGCAAGCTTGAAGCC
GGTCAGGAGACCGAGGACGTGGTCGGCATCGCCGGGCGCGTCCTGTTTCTGCGCAACGGCGGCGGCCTGTGCTTCGTGCA
GCTGTCGGCCGGCGACGGCACGAAGATCCAGGGCATGATCTCCAAGAAGGAGATCGGCGCTGACTCGCTCAAGCAGTTCA
AGCAGCTCGTGGACCTCGGCGACCACCTGTACCTGCGTGGCCGCGTGATCGCGTCCAAGACCGGCGAGCTATCTGTGTTC
GCCACCGAATGGGCCATCGCGTCCAAGGCGCTGCAGCCGCTGCCCGCCCTGCACAAGGACCTGAACGACGACACGCGCAC
GCGCAAGCCGTACATCGGCATGATCGCCGATGAGAAGGTGCGCAACATGGTGCGCAACCGGTCCAAGGCCGTCGCCTCGC
TGCGCCGCACGTTCGATGACCACGACTTCCTCGAGGTCGAGACGCCGATGCTGCAGACTATCCACGGCGGTGCCGCCGCC
CGTCCGTTCACCACGCACATGAACGCCTTCGACTTGGATCTTTATCTGCGCATCGCGCCGGAACTGTTCCTCAAGCGCTG
CCTCGTGGGCGGCATCGACCGCGTGTTCGAGATCAACCGCGACTTCCGCAACGAGGGCGTCGACGCCACGCACGCCCCCG
AGTTCACGATGGTCGAGGCCTACCAGGCGTACGGCACCTACGACACCATCGGCCAGCTGGTCAAGGAGCTCGTGCAGAAG
ACCGCGATGGACGTGTTCGGCTCCCATAAGGTCACGCTGCTCGACGGCACCGAATACGATTTCGGCGGCGACTGGAAGAC
CATCAGCATGTATGATTCGCTCTCCGAGGCGCTCGGCGAAGAGATCGTGCCGAACGGCGGGCCGGACAACCCCGGCACTT
CCGTGGAGCATCTGGGCGAGATCGCCGACAAGCTCGGCGTGGAGCGTGACGACGTTGAGAACCACGGCAAGCTCGTCGAG
CACCTGTGGGAGCACTTCTACGAGGACAAGCTATACGAGCCGACCTTCGTGCGCGACTTCCCGGTCGAGACCTCCCCGCT
GGTCAAGGGCCACCGCAACAAGGCCGGCGTGGTGGAGAAGTGGGACCTCTACGTGCGCGGCTTCGAGCTGGCCACCGGCT
ACTCCGAGCTCAACGACCCGATCGTGCAGCGCGAGCGTTTCGTGGCTCAGGCCAAGGATGCGCTGGCCGGTGACGAGGAG
GCCTGCGACATCGACGAGGACTTCTTGGAGGCCCTCGGCGTGGGCATGCCCCCGGCGGGCGGCATGGGCATGGGCATCGA
CCGACTGCTCATCGCCCTGACCGGTGCCACGATCCGCGAGACCATCACCTTCCCGCTGGTCAAGCCGCTGGCGTTGCAGT
AA

Protein sequence :
MLLRQDAAIRDRIGAGATLDEAVDPSNKEFGPLAHPEQVQMRVAKRAMMLEAGMQPYPVHLDVTDTIEAVRAKYDGKLEA
GQETEDVVGIAGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLYLRGRVIASKTGELSVF
ATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKAVASLRRTFDDHDFLEVETPMLQTIHGGAAA
RPFTTHMNAFDLDLYLRIAPELFLKRCLVGGIDRVFEINRDFRNEGVDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQK
TAMDVFGSHKVTLLDGTEYDFGGDWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDVENHGKLVE
HLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFELATGYSELNDPIVQRERFVAQAKDALAGDEE
ACDIDEDFLEALGVGMPPAGGMGMGIDRLLIALTGATIRETITFPLVKPLALQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lysS YP_005163386.1 lysyl-tRNA synthetase Not tested Not named Protein 4e-135 56