Gene Information

Name : metB (BBPR_1343)
Accession : YP_003971430.1
Strain : Bifidobacterium bifidum PRL2010
Genome accession: NC_014638
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 1581430 - 1582617 bp
Length : 1188 bp
Strand : -
Note : -

DNA sequence :
ATGACCATCACCATCTCCACCAACGCCGCAGCCCTCGCCAACACCACGCTCGCCACCCGTGCCATCCACGCCGGTCAGGA
GCCCGACCCGACCACCGGCGCCGTCGTCACGCCGATCTACATGACCTCCACGTTCAAGCAGGACGGTGTGGGCGGACTGC
GTAACGGCTACGATTACAGCCGATCCGTCAACCCCACGCGAAACAGCTTCGACGCGCAGCTCGCCGCCGTCGAAGGCGCG
AAATACGCGCTGAGCTTCTCTTCCGGACTTGCCGCGATTGACGTGCTGCTGCGGGCCACGCTGAAGCCGGGCGACAACAT
CCTGCTCGGCAACGACGTGTACGGCGGCACCTACCGTCTGCTCGCCAAGGTGTTCGTGCCGTGGGGCATCGGGCTCGACG
TGGTCGACATCACCGACACGGCCGCCGTCGCCGCCGCGCTTGAAGCCAAGCAATACCGGTACATCTGGGTGGAGACGCCC
TCCAACCCGCTGCTCAACATCACCGACATCGCCGCGACCGCCGACGTCGCGCATCGGCACGGCACCAAGGTCGTGGTGGA
CAACACGTTCGCTTCCCCGGTGCTGCAGCATCCGCTCGACGACGGTGCCGACGCGGTCGTGTATTCGACCACCAAGTACA
TCGGCGGGCATTCCGATGTGGTCGGCGGCGCGATCGTGCTCAACGACGAAGAAACCCGCGACGCGGTCGCGTTCCTGCAG
AACGCCGCCGGCGCGGTGCCATCCCCGTTCGACTCGTGGCTGGACATCCGCGGCCTGAAGACCCTGGCCGTGCGAGTGCA
GCGCCACAGCGAAAACGCGCTGAAGATCGCGCAATGGCTGGAAACCCGTCCGGAAGTGGAGCGCGTGTGGTACCCGGGAC
TGGAATCCCACCCGGGTCACGAGATTGCCGCCCGTCAGATGCACGGCGGCTTCGGCGGCATGATTTCCGTGCAGCTCACG
GCCGGTTTCGAGGCGGCCAAGCGGTTCGCCGGCGCCACGCAGATCTTCACGCTCGCCGAGTCACTGGGCGGAGTGGAGAG
CCTGATCGAGCACCCGGGCGCGATGACCCACGCCTCAGTGGCCGGCACCACGCTGGAGGTGCCCGCGAACCTGGTGCGCC
TGTCCGTCGGCATCGAAGGCACCGACGACCTGATCGCCGACCTGGAGCAGGCCTTCGCCGCCATCTGA

Protein sequence :
MTITISTNAAALANTTLATRAIHAGQEPDPTTGAVVTPIYMTSTFKQDGVGGLRNGYDYSRSVNPTRNSFDAQLAAVEGA
KYALSFSSGLAAIDVLLRATLKPGDNILLGNDVYGGTYRLLAKVFVPWGIGLDVVDITDTAAVAAALEAKQYRYIWVETP
SNPLLNITDIAATADVAHRHGTKVVVDNTFASPVLQHPLDDGADAVVYSTTKYIGGHSDVVGGAIVLNDEETRDAVAFLQ
NAAGAVPSPFDSWLDIRGLKTLAVRVQRHSENALKIAQWLETRPEVERVWYPGLESHPGHEIAARQMHGGFGGMISVQLT
AGFEAAKRFAGATQIFTLAESLGGVESLIEHPGAMTHASVAGTTLEVPANLVRLSVGIEGTDDLIADLEQAFAAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-70 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-71 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 6e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB YP_003971430.1 cystathionine gamma-synthase BAC0207 Protein 9e-60 43