Gene Information

Name : Ilyop_2523 (Ilyop_2523)
Accession : YP_003968630.1
Strain :
Genome accession: NC_014633
Putative virulence/resistance : Resistance
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 642942 - 643604 bp
Length : 663 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: amt:Amet_3209 two component transcriptional regulator; PFAM: response regulator receiver; tran

DNA sequence :
ATGGAAAGAATTTTACTTTTAGAAGATGAGGATAAAATGAGAAAGGTGGTAAAGAACTTTCTTGTAAAAGCCGGTTATGA
GGTTATAGAGGCCTGCGACGGAGAAGAAGCTTTAGAATTATTTTACGAGAATACTTTTGATCTGGCAATTTTAGATGTTA
TGGTTCCCAAAATTGACGGATGGACTATATGCAGGAAAATAAGAAAAGAGTCTAAAATTCCAATTATAATGTTGACTGCA
AGAAGTACTGAGGATGACGAGCTGTTTGGATTTGATCTAGGGGCGGATGAATATATAACTAAGCCCTTCAGCCTTAAAAT
ACTCTTAGCAAGAGTCAAGGTGCTGTTAAAAAGAAAAGATACTAAAACAGAAGAGAATAGCTTAAAAGTTGGTAAATTAG
AAATTGACTCTAGTAGCCATCGGGTAATTTTTTTTGATGAAATTTTGGATTTGACTCCAAAGGAGTATGATATGCTCCTT
ATGATGGTTGAAAACAAAGATATTGCTATTTCCAGAGAGAGATTTTTAAACCAGATATGGGGTTTTGATTATTATGGAGA
CCTTCGAACTGTGGACACCCATGTAAAACAGCTGCGTAAAAAACTTAAAGGGAAACATATTAAGACTGTTCGTGGAGTTG
GGTATAGGTTTGAGGAGGAATAA

Protein sequence :
MERILLLEDEDKMRKVVKNFLVKAGYEVIEACDGEEALELFYENTFDLAILDVMVPKIDGWTICRKIRKESKIPIIMLTA
RSTEDDELFGFDLGADEYITKPFSLKILLARVKVLLKRKDTKTEENSLKVGKLEIDSSSHRVIFFDEILDLTPKEYDMLL
MMVENKDIAISRERFLNQIWGFDYYGDLRTVDTHVKQLRKKLKGKHIKTVRGVGYRFEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-38 47
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 5e-38 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family AE016830.1.gene2255. Protein 2e-38 47
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family U35369.1.gene1.p01 Protein 2e-38 47
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family AF310956.2.orf0.gene Protein 2e-38 46
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family HE999704.1.gene1202. Protein 6e-39 45
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_002952.2859905.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_007793.3914279.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_007622.3794472.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_002745.1124361.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_009782.5559369.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_002951.3237708.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_002758.1121668.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_009641.5332272.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_013450.8614421.p0 Protein 1e-34 43
Ilyop_2523 YP_003968630.1 two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 1e-34 42