Gene Information

Name : Ilyop_2441 (Ilyop_2441)
Accession : YP_003968548.1
Strain :
Genome accession: NC_014633
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 552396 - 553073 bp
Length : 678 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867:IPR011006; KEGG: fnu:FN1261 two-component response regulator; PFAM: response regulator receiver; transcriptiona

DNA sequence :
ATGAAAAAAATATTAATTATAGAAGATGAAAAAAAAATAAGCAGATATCTCCAGCTTGAGCTAGAACATGAAGGTTATTC
TGTGGATATTGCTTCTGATGGTATAATGGCATTAAAGTTGTTCGGGGAAAATTTTTATAACATAATTCTCCTTGATCTCA
TGCTTCCCAAACTTTCTGGTGAAGAGGTTTGCCGTCGGATAAGAAAAAAATCAGATGTCCCGGTAATAGTGCTTACAGCA
ACTGATAAGACTTTTAGCAAAATAAATCTATTAGATTTAGGGGCAGATGACTATATAACAAAGCCCTTTATAATTGGAGA
GCTTTTGGCCCGAATAAGAGTGGCACTTAGGCACAATAAGGAGTTTTCTGACAAAGGTCAGGTGATTAGTTATGAAGGAA
TACGACTGGATTTAAATAAAAAATTAGTTATTGTTCAAGAAGAAGAAATATCCCTTACCAAGACAGAATTTAATCTTCTT
CATTATCTTATATTAAACAGAGAGATAGTTTTATCTAGGGAAAAGATTCTAAATAATATATGGGGATATGACTATAATGG
AGGAGAAAAAATAGTAGATGTGTACATAAAATCTCTCAGAAAAAAAGTGGATTTTAGAGAAAAAAAACTTATTCATACAG
TAAGAGGTTTCGGATACATGTTAAAAAAGGAGAGTTAA

Protein sequence :
MKKILIIEDEKKISRYLQLELEHEGYSVDIASDGIMALKLFGENFYNIILLDLMLPKLSGEEVCRRIRKKSDVPVIVLTA
TDKTFSKINLLDLGADDYITKPFIIGELLARIRVALRHNKEFSDKGQVISYEGIRLDLNKKLVIVQEEEISLTKTEFNLL
HYLILNREIVLSREKILNNIWGYDYNGGEKIVDVYIKSLRKKVDFREKKLIHTVRGFGYMLKKES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_003923.1003417.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_013450.8614146.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002951.3238224.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_007793.3914065.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002758.1121390.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_010079.5776364.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002952.2859858.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_007622.3794948.p0 Protein 5e-43 47
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family AE015929.1.gene1106. Protein 9e-39 46
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family HE999704.1.gene1528. Protein 1e-37 45
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family BAC0125 Protein 4e-36 44
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002952.2859905.p0 Protein 2e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_013450.8614421.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_007793.3914279.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_003923.1003749.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_007622.3794472.p0 Protein 2e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002745.1124361.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_009782.5559369.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002951.3237708.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_002758.1121668.p0 Protein 3e-33 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family NC_009641.5332272.p0 Protein 3e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family VFG1390 Protein 4e-39 42
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family VFG0596 Protein 1e-31 41
Ilyop_2441 YP_003968548.1 two component transcriptional regulator, winged helix family VFG1386 Protein 2e-33 41