Gene Information

Name : Ilyop_0397 (Ilyop_0397)
Accession : YP_003966533.1
Strain : Ilyobacter polytropus DSM 2926
Genome accession: NC_014632
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 448501 - 449667 bp
Length : 1167 bp
Strand : +
Note : COGs: COG1004 UDP-glucose 6-dehydrogenase; InterProIPR016040:IPR008927:IPR014027:IPR001732:IPR 014026:IPR017476; KEGG: esi:Exig_2624 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimeris

DNA sequence : 
ATGAAAATATGTGTAGCTGGAACTGGATATGTAGGATTGTCAAATGCAGTGTTATTAGCTCAAAATAACGAGGTAGTGGC
ATTGGATGTGATACAGGAAAAGGTGGATATGATAAATAACAGAAAATCCCCTATAGCAGATAATGAGATAGAAGATTTTC
TTGCAAATAAAGAGTTAAATCTTATAGCTACTACAGATGCCTACAAGGCCTATGAAAATGCAGAATATGTTATCATATCT
ACTCCTACTAACTACGATCCAGATAAAAACTACTTTAACACAAGAACAGTAGAAGCTGTAATAGCCAATGTACTGGCCAT
CAATCCAGAAGCAACTATGATTGTGAAATCTACGGTGTCAGTAGGATATACAGAAAAAGTAAGGGAGATGTTTGATACAG
ACAACATTATTTTCTCACCTGAATTCTTGAGGGAAGGGAAGGCGCTTTATGACAACTTATATCCGTCAAGAATAATAGTA
GGGGAAAAATCAGAGAGAGCCGAAAAGTTTGCCAATCTTTTGGCAGAGGGAGCTATAAAAGAAAATATCGATATTCTATT
TACCAACTCAACCGAGGCAGAGGCGGTAAAGTTATTTTCAAATACTTATTTAGCTCTCAGAGTTGCTTATTTCAATGAAC
TTGATACCTATGCAGAGCATAGAGGTCTAGATGCTAAGCAAATTATAGAAGGGGTTGGATTTGATCCAAGAATAGGAAAC
CATTATAACAATCCATCTTTTGGTTACGGAGGGTATTGCTTGCCTAAGGATACAAAGCAGCTTAGAGCAAACTATGACCA
GGTGCCTAATAATATAATTGGTGCAATAGTAGACGCCAACACAACTAGAAAAGATCATATAGCCGAGATGATATTAAAGA
GAGAACCTAAAACTGTGGGGATATACAGGCTTACTATGAAAACAGATTCTGATAACTTCAGGGATTCTGCTGTGCAGGGT
ATAATGAAAAGAATCAAGGCCAAGGGTGTTGAAGTGGTTGTATATGAGCCTGCACTTAAAGAGGAGAGTTTCTTTAAGTC
TAGAGTTATTAATGATTTGGATGAGTTTAAGACTATGTCAGATGTTATAGTAACAAATAGACTTTCAGATGATCTTGTAG
ATGTAGAAGAGAAGATCTATACAAGGGATCTTTATAAAAGAGACTAA

Protein sequence : 
MKICVAGTGYVGLSNAVLLAQNNEVVALDVIQEKVDMINNRKSPIADNEIEDFLANKELNLIATTDAYKAYENAEYVIIS
TPTNYDPDKNYFNTRTVEAVIANVLAINPEATMIVKSTVSVGYTEKVREMFDTDNIIFSPEFLREGKALYDNLYPSRIIV
GEKSERAEKFANLLAEGAIKENIDILFTNSTEAEAVKLFSNTYLALRVAYFNELDTYAEHRGLDAKQIIEGVGFDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYDQVPNNIIGAIVDANTTRKDHIAEMILKREPKTVGIYRLTMKTDSDNFRDSAVQG
IMKRIKAKGVEVVVYEPALKEESFFKSRVINDLDEFKTMSDVIVTNRLSDDLVDVEEKIYTRDLYKRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-94 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_0397 YP_003966533.1 nucleotide sugar dehydrogenase VFG0963 Protein 1e-99 56