Gene Information

Name : Ilyop_1493 (Ilyop_1493)
Accession : YP_003967621.1
Strain : Ilyobacter polytropus DSM 2926
Genome accession: NC_014632
Putative virulence/resistance : Resistance
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1609939 - 1610592 bp
Length : 654 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR011006:IPR001789:IPR001867; KEGG: eel:EUBELI_01177 two-component system, OmpR family, response regulator ResD; PFAM: response re

DNA sequence : 
ATGAAAAAGATACTTGTGGTAGAAGATGAATGGAAGATGCGAAGGCTGATAAAAGATTATCTGGTGAAGGAAGGATATCA
TGTAGACGAGGCAGGAGACGGGATGCAGGCATTAGAAATGTTTCAGGAAGGTGGATATGATCTCGTAATACTAGATATAA
TGCTTCCTAAAATGGATGGGTGGAGTGTATGCCGTGAAATAAGAAGAGAGTCTATGGTTCCTGTTATAATGCTGACAGCC
CGTAGTGAGGAAAATGATCAGATTTTTGGATTTGAGCTGGAAGCGGATGAATATATAACCAAACCTTTTAATCCTAGACT
GCTTGTGGCGAGAATAAAAGCTATATTCAGAAGAGCTGGTAAACCTGATAAAATAAGCCGCGGAGATATAGAGATAGATG
AAGGAAGCAGGAAAGTAGAGATAAAAGGCGAGGCGGTGGAGTTAACTTCTAAGGAGTTTGAAATGCTGCTTTATTTTGTT
CAGAATAGAGGCATTGCTCTTTCTAGGGAAAAGATACTGAACTCTGTATGGGGATGGGATTATTTTGGAGATGTGAGAAC
TGTGGACACCCATGTGAAAAGATTGAGAAAAAAAATAGGAGAAATATATATACAAACAATAAGAGGATTTGGCTATCGTT
TTGAGGAGGGATAA

Protein sequence : 
MKKILVVEDEWKMRRLIKDYLVKEGYHVDEAGDGMQALEMFQEGGYDLVILDIMLPKMDGWSVCREIRRESMVPVIMLTA
RSEENDQIFGFELEADEYITKPFNPRLLVARIKAIFRRAGKPDKISRGDIEIDEGSRKVEIKGEAVELTSKEFEMLLYFV
QNRGIALSREKILNSVWGWDYFGDVRTVDTHVKRLRKKIGEIYIQTIRGFGYRFEEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-41 45
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 7e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_012469.1.7685629. Protein 1e-42 46
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator AF310956.2.orf0.gene Protein 8e-42 45
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator U35369.1.gene1.p01 Protein 2e-41 45
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator AE016830.1.gene2255. Protein 2e-41 45
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator HE999704.1.gene2815. Protein 2e-40 45
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_002952.2859905.p0 Protein 2e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_009782.5559369.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_002951.3237708.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_002758.1121668.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_009641.5332272.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_003923.1003749.p0 Protein 2e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_013450.8614421.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_007793.3914279.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_002745.1124361.p0 Protein 3e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator NC_007622.3794472.p0 Protein 2e-41 44
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator AE016830.1.gene1681. Protein 2e-44 42
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator FJ349556.1.orf0.gene Protein 5e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_1493 YP_003967621.1 winged helix family two component transcriptional regulator VFG1386 Protein 2e-32 43