Gene Information

Name : Ilyop_1053 (Ilyop_1053)
Accession : YP_003967182.1
Strain : Ilyobacter polytropus DSM 2926
Genome accession: NC_014632
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 1142244 - 1145294 bp
Length : 3051 bp
Strand : -
Note : COGs: COG0610 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR014001:IPR007409:IPR006935; KEGG: dde:Dde_1859 DEAD/DEAH box helicase-like; PFAM: protein of unknown function DUF450; type III res

DNA sequence :
ATGCTTGAATTTACTGATACCTCAGAAAAAGGATTTCAAAAACTCATAGTAAAAGAGCTTGTTGGAAAAGAGGGGTATAT
CGAAACACATTCAAATGATTTTGATAGAGATTTCTGTCTAAATAAAAAAGATCTTTTTGAATTTATAGAAATTAGTCAAC
CTGATTCTTATGATTTTATTATAAAGAAAGGTGAAGACGCTTTTTTAAATAGATTAGACTTAAAAATAAAAAAAGAAGGA
ATTATCGAAGTTCTTAGAAAGGGAGTAAAACATTTCGACAAGACAATATATCTCTTTTATCCACAACCAAATTCTAATCA
TAATAAAAAAGATCACTTAAGGTATGAGACAAACATTTTTTCTGTCACACAAGAATTGGTTTATACAGGTAATAATAAAA
ATAGAATTGATTTAGTTATCTTTATAAACGGGTTTCCAATTATTACAATGGAACTTAAAAATGCTTTCACGCATCAAGCA
GTAAAAAATGCAATAAAACAATATAAAAAAGATAGGGACCCTAATGATAAAATTTTTAATTTTGCTCGTTGCCTAGTTCA
TTTTGCGATAGATACAGATCTTGCATATATGACAACAAAGTTAGATAAATCTAAAACATTTTTTATGCCATTTAATAAAG
GTCTTAATAATGGTGAGCCATTTCCTCCATATGGAGCAGGGAACCCTATAAACCCTTTAGGTTTAAAGACATCTTATATT
TGGAGAGATATTTTAACAAGGAGTAGTCTTTCAAATATAATTGAAAAATTTGTACATTTAGAAAAACCAAAGGTAAAATC
AGATAAATCTAAGTTAATTTTCCCAAGATATCATCAACTAAAAGTTGTAAGGAAATTATTAGAAGACTCTAAAGAAAAAG
GGATTGGGATAAAATATCTAGTGCAACATTCTGCCGGATCAGGAAAATCGAACTCTATAACTTGGCTTGCTCATCAATTG
ATAGGATTGTATGATAAAAATAATATAAGCCCAATTTTTGATAGCGTAGTTGTAGTAACTGATAAAACTATACTTGATAA
ACAAATAAGGGAAAACATTAAAAACTTTGCACAAGTAAAAAATATAGTCGAAGCCATAACAGGAAATTCAACTGACATAA
AGAAACTAGACCCAACAGAGACATCAATGAGTAAAACATCTCATATGAGATTGGCTCTTGAAAATAATAAAAAAATTATT
ATTTGTACTGTTCAAACTTTCCCTTATGTATTGAAAACAGTACAAGAAATGGAAACAAAAAATATAGCATTTATCATTGA
TGAAGCACATAGTGGTCAAAATGGAATATCTTCTGCTAGTATGAATGCAATTTTTTCAAATACTGATTTTACTAAACTTA
AAATGGATGAAGAAGGAAATATAGATACAGAAGATTTAGTAAATTATTTAATTAAAACAAAAAAAATGTTAGATAACGCA
AGTTATTTTGCGTTTACAGCAACACCCAAAAATAAAACTCTTGAAACTTTTGGAACGAAACAAGAAGATGGAACCTTTAA
GCCATTTCATAATTACTCAATGAAACAAGCTATAGAAGAGGAATACATTTTAGATGTTTTACAGAACTATACAACTTATA
AATCATATTATAAGATAAAAGCAGATAATAATGTACCTGAGGAAAAAGAATATGAAATAAAACAGGCAAACAAAAAAATA
AAGAATTTTGTTGAAGGCAATGAGCTCGCAATAGCAGAAAAAGCAAAAATTATGGTAGATCATTTTAATAAAAACGTAAA
GCATTTAATAAATTATCAAGCAAAGTCAATGGTAGTTACAAAATCTATAGAGAGTGCAATGAAGTATAAAGATGCATTTG
ATAAATATCTGAAAGAGACAGGCCTACCATATAAAGCAATCGTTGCATTTTCAGGAAAAAAAGCACATTATAAAACAGGC
TTAGAAATGACAGAATCTGATATGAATAATTTTTCTGATGGTGATAATGATATCGTAAAACAATTTAGAAAAAATGAGTA
TAAATTTTTAATTGTTGCTGATAAATTTCAAACAGGTTTTGATCAGCCATTATTACATACTATGTATGTTGATAAAGAAT
TATCTGGCGTTCAAGCTGTACAAACTTTATCAAGGCTAAATAGGGCATTCAAACCTCATAAAACAGATACCATGGTCCTC
GACTTTTATAATGACATAGAATCAGTAAAAAAAGCTTTTGAGCCATACTACACAACAACTATTTTGTCGGAAGAGACAGA
TGTTAATAAATTAAATGATTTGCAAGACTCATTAGACAACATGCAAGTTTATAGTGAAGAAGAAGTTGAAGAATTTTTTA
AACTTTATTACACAAATGCTGAAAGAAATATTTTAGAACCGATAATAAATAACTGTAAAGAAATTTTTGATACACATTTA
GAAAAAGAAGAACAGATAAAGTTTAAATCAAATGCAAAATCATTTGTGAGAACATACAGCTATTTATCAAAAATTATAGA
ATATGACGTACCCTATTGGGAAAAATTATGGCTATTTTTAAAACATTTAATTACAAAAATAAAAATTCAAGATGAAGAGA
TAAATGAAAATATATTAAATGAAGTCGATATGGATAGTTATAGAATAAATAGAATCGGAACAACTAAAATATCTTTAGAA
GAAGAAGAGGGAATAATTGAACCTATCCCAGTAAGTACTAGTAGCGGTATAGCTGAAAAACATTATGATACCTTATCACA
TATAATATCTGAATTTAATCGAAGGTTTGGCGATATTAATTGGGGAGATGATGTAGATAAGGAAGAAGCGGAAAAGATCC
TTATTGAAAAAATTCCTGATAAAATGAAAGCTAATATTAAAATTTTGAAATCGATTATAAATTCTGATAAAGATAATGCA
AAAATTACATCTGATGAAAAAGTACAGGATTTAATGTTTGATTTAATGAGTACTAATACAGGGATTTATAAAAAGTTTGT
AAGTGACCCCGATTTCAAAAATAGATATTTAGAATTTGTATTTGACATTTTATGGGATATAAAAAATTCATCTATTAAGG
AAATAATATAA

Protein sequence :
MLEFTDTSEKGFQKLIVKELVGKEGYIETHSNDFDRDFCLNKKDLFEFIEISQPDSYDFIIKKGEDAFLNRLDLKIKKEG
IIEVLRKGVKHFDKTIYLFYPQPNSNHNKKDHLRYETNIFSVTQELVYTGNNKNRIDLVIFINGFPIITMELKNAFTHQA
VKNAIKQYKKDRDPNDKIFNFARCLVHFAIDTDLAYMTTKLDKSKTFFMPFNKGLNNGEPFPPYGAGNPINPLGLKTSYI
WRDILTRSSLSNIIEKFVHLEKPKVKSDKSKLIFPRYHQLKVVRKLLEDSKEKGIGIKYLVQHSAGSGKSNSITWLAHQL
IGLYDKNNISPIFDSVVVVTDKTILDKQIRENIKNFAQVKNIVEAITGNSTDIKKLDPTETSMSKTSHMRLALENNKKII
ICTVQTFPYVLKTVQEMETKNIAFIIDEAHSGQNGISSASMNAIFSNTDFTKLKMDEEGNIDTEDLVNYLIKTKKMLDNA
SYFAFTATPKNKTLETFGTKQEDGTFKPFHNYSMKQAIEEEYILDVLQNYTTYKSYYKIKADNNVPEEKEYEIKQANKKI
KNFVEGNELAIAEKAKIMVDHFNKNVKHLINYQAKSMVVTKSIESAMKYKDAFDKYLKETGLPYKAIVAFSGKKAHYKTG
LEMTESDMNNFSDGDNDIVKQFRKNEYKFLIVADKFQTGFDQPLLHTMYVDKELSGVQAVQTLSRLNRAFKPHKTDTMVL
DFYNDIESVKKAFEPYYTTTILSEETDVNKLNDLQDSLDNMQVYSEEEVEEFFKLYYTNAERNILEPIINNCKEIFDTHL
EKEEQIKFKSNAKSFVRTYSYLSKIIEYDVPYWEKLWLFLKHLITKIKIQDEEINENILNEVDMDSYRINRIGTTKISLE
EEEGIIEPIPVSTSSGIAEKHYDTLSHIISEFNRRFGDINWGDDVDKEEAEKILIEKIPDKMKANIKILKSIINSDKDNA
KITSDEKVQDLMFDLMSTNTGIYKKFVSDPDFKNRYLEFVFDILWDIKNSSIKEII

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1765 NP_231400.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 3e-168 41
VC0395_A1363 YP_001217306.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 3e-168 41
VPI2_0013c ACA01830.1 type I restriction enzyme HsdR Not tested VPI-2 Protein 5e-167 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ilyop_1053 YP_003967182.1 hypothetical protein VFG1098 Protein 1e-168 41