Gene Information

Name : D11S_2358 (D11S_2358)
Accession : YP_003966131.1
Strain :
Genome accession: NC_014629
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 21685 - 23856 bp
Length : 2172 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
TTGGATGGTCATTTTTCTTCCGAGTTTACGCAGGAAGTAAATGATAAATACTATGCCGGTTTTAATAATGGAACATTACA
ACGTAACATACTATACGTTACGTTGGTTTATACCCCTTATTCAAAATTGGAAAAAATATCTCGTAAAACAACCAAGTTAA
AGGATAAAAAACAGGAGCTTGCTTATCAATTAGAGACTATGCAAGAAATGTGTTCCCGCTTGGATAAAGCACTGGAAGAT
TTTCGCGGTGAAGCGTTAACTACCTTTAGTAAAGGCGGTGCGCTTTATTCTGAACAATTATCGTTTTACAACTATCTGAT
TACAAATCGTTGGCAACCGGTACGCGTTACTTCCACGTCGTTTTATCACTTACTGGGGAATACCGATTTACATTTTGGCA
AAGAAACCGGGCAAATTACTTTTAATGGTGAAAGCCGTTTCTTCCGCTGTCTTGAAATTAAAGATTATACGGAAGAAACC
TGTGAAGGTTTTTTTGACGCATTAATGTATATCAATGCCGATTATGTCATTACACAATCTTTTCAGGCTATGCCAAGCAA
TGTTGCAAAAGAGAAGTTAGACAGACAGCAAAAACGCTTAAATTCCTCAAATGAGGCTGCCATTTCGCAAGTTGATAATT
TAACTGTTGCATTGGATGATTTGGCAAGTGGTCGTTTATCCTTTGGTTATTATCATTTTGGCATGATGGTGTACGGTGAT
TCTATAAAAGATGTTACTGATAAAACCAATGAAATTATTGCGGTATTAAGTAGTTTAGGTTTGATTATTACATTGGCAAA
TACGGCGTTAAGCGCGTCTTATTTCGGTCAATTCCCGGCAAATTTTGCCTACCGTCCACGCCTGGCAATGTTAAGTTCAA
GAAATTATGCGTCGCTAACTTCTTTACATAATTTTGCCTCCGGTAAACGCAACGGGAACCCTTGGGGAGACGCAGTAACG
TTGCTGAAAACACCAAACGGTCAACCGTACTATTTTAACTTTCACCAAAGCGCACCCGGTGTTGATGACAGAGGCGAAAA
ACGGTTGGGGAATACCGCAGTATTCGGGCAAGCAGGTTCCGGTAAAACTATGTTGATGACGTTTCTCATGACACAACTGG
ATAAATTCAGACATACCTCTACTTTTTTACCGACCTCGGTAAAACGTGAATTGACAATGGTATATCTGGATAAAGATTAC
GGTGCGGAAGCCTGTATTCGTGCCATGGGCGGAAAATACATGCTGATCCGTAAAGGTGCGCCGACCGGTTTTAATCCGTT
TATGTGTGAAAACACGCCGGAAAATCTGTCTTTCCTTTCCACGTTGATGAAAATGTTAGTTACGCGTAACGGCAGAACGT
TGTCATCACTCGATGAAGAAGAATTATTCAAGGCGGTTAAATCGGTGATGGAATTTGATATGGAATACCGCAGTTATCCG
ATTTCTCGCGTGATCGAACATTTGCCGGAAGGCTCAACTAAAGCCGAAAAAGAAAACTCCCTTGCCCGTCGTTTGAAAAA
CTGGGCGCAAGGTGGGGAATTCGGTTGGGTATTTGATAATCCTGCCGATACGTTAGATTTTACCGGGCATGCGGTATTTG
GCATTGACGGTACGGAGTTTTTAGATGACCAGGATACTTGTAGTCCGCTTTCTTTCTATTTATTACACCGTATCGGAAAA
TTATTAGATGGTCGTCGTTTGATCATTTTTATGGATGAATTCTGGAAATGGTTAAAAGATGAAGCGTTTTCCGACTTTGC
CTATAACAAATTAAAAGTTATTCGGAAAGAAGATGGAATTGTCATACCGATGACCCAAAGTATGGATGAAGTGTTGAAAA
GCCCAATTTCCCGCGCGGTAGTTGAGCAATGTGAAACAACCATTTGTTTACCTAACCCGATTGCACGCAAAGTAGATTAT
GTGGATGGTTTCGGAATCAGCGAAAAACAATTTCAAATTATCCGCGAATTACAACCGGATTCCCGTACTTTCTTAGTGCG
TAAAGGACTCGAAACCGCCTTAGCTAAGTTAGATTTAAGCGGTTTAGGGCGTGAAAACTTAAAAATTCTGTCAACCAGTA
AGGATAACGCAGAAATCCTACATCAAATTATCGAAGAAGTCGGCGAAGCCGCTAATGACTGGATTCCGATTTATAAACAA
CGTTGTGTATAA

Protein sequence :
MDGHFSSEFTQEVNDKYYAGFNNGTLQRNILYVTLVYTPYSKLEKISRKTTKLKDKKQELAYQLETMQEMCSRLDKALED
FRGEALTTFSKGGALYSEQLSFYNYLITNRWQPVRVTSTSFYHLLGNTDLHFGKETGQITFNGESRFFRCLEIKDYTEET
CEGFFDALMYINADYVITQSFQAMPSNVAKEKLDRQQKRLNSSNEAAISQVDNLTVALDDLASGRLSFGYYHFGMMVYGD
SIKDVTDKTNEIIAVLSSLGLIITLANTALSASYFGQFPANFAYRPRLAMLSSRNYASLTSLHNFASGKRNGNPWGDAVT
LLKTPNGQPYYFNFHQSAPGVDDRGEKRLGNTAVFGQAGSGKTMLMTFLMTQLDKFRHTSTFLPTSVKRELTMVYLDKDY
GAEACIRAMGGKYMLIRKGAPTGFNPFMCENTPENLSFLSTLMKMLVTRNGRTLSSLDEEELFKAVKSVMEFDMEYRSYP
ISRVIEHLPEGSTKAEKENSLARRLKNWAQGGEFGWVFDNPADTLDFTGHAVFGIDGTEFLDDQDTCSPLSFYLLHRIGK
LLDGRRLIIFMDEFWKWLKDEAFSDFAYNKLKVIRKEDGIVIPMTQSMDEVLKSPISRAVVEQCETTICLPNPIARKVDY
VDGFGISEKQFQIIRELQPDSRTFLVRKGLETALAKLDLSGLGRENLKILSTSKDNAEILHQIIEEVGEAANDWIPIYKQ
RCV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70302.1 Pilx3-4/VirB3-4-like protein Not tested HPI Protein 1e-155 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_2358 YP_003966131.1 hypothetical protein BAC0398 Protein 3e-153 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_2358 YP_003966131.1 hypothetical protein VFG2211 Protein 3e-137 41