Gene Information

Name : D11S_2320 (D11S_2320)
Accession : YP_003966093.1
Strain :
Genome accession: NC_014629
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1560 - 1997 bp
Length : 438 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGGCTGGAGTTAATAAAGTCATTATCGTTGGTCGTTTAGGCAATGAGCCGGAAATGCGCGCCATGCCGAACGGAGAAGC
TGTCGCGAATATTAGTATTGCGACCAGTGAAAGCTGGACGGATAAAAATACCGGAGAACGCCGGGAAGTAACCGAATGGC
ACCGTGTCGTATTTTATCGCCGTCAAGCGGAAGTGTGCGGTGAATACCTGCATAAAGGCTCACAAGTGTACATTGAAGGG
CGTTTAAAAACGCGTAAATGGCAAGACCAAAGCGGGCAAGACCGTTATACCACTGAAATTCAAGGTGATGTATTGCAAAT
GTTAGGTGATCCGAAATCAACACAGGCACCGGCACAAGCCCAGGCTAAACCGGTAACGTCACCACAACCACAAGCGGGAA
CTCCGGCAGATAATTTTGATGATGATATTCCGTTCTGA

Protein sequence : 
MAGVNKVIIVGRLGNEPEMRAMPNGEAVANISIATSESWTDKNTGERREVTEWHRVVFYRRQAEVCGEYLHKGSQVYIEG
RLKTRKWQDQSGQDRYTTEIQGDVLQMLGDPKSTQAPAQAQAKPVTSPQPQAGTPADNFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 1e-48 71
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 9e-36 54
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-35 54
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-35 54
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 8e-26 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
D11S_2320 YP_003966093.1 single-strand binding protein VFG0576 Protein 4e-34 52