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Name : PPSC2_p0117 (PPSC2_p0117) Accession : YP_003965579.1 Strain : Genome accession: NC_014628 Putative virulence/resistance : Unknown Product : Group II intron reverse transcriptase maturase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 120535 - 122046 bp Length : 1512 bp Strand : - Note : - DNA sequence : ATGTGGGATCGCATTATCCAACAATGCATCTTGCAGGTATTAGAACCTATAGGTGAAGCAAAGTTCCATGTTCGAAGCAA TGGCTTCCGCCCGAATCGGTCAACGGAACATGCCCTTGCACAATGCTACAAAATGGCACAGCAACAAAACCTCCATTTTG TAGTAGATATCGACATCAAGGGATTCTTCGATAATGTCAATCATGGAAAACTGCTAAAACAAATATGGGCTATGGGAATC CAGGATAAGAATCTTCTTTGCATCATATCTAAAATGCTGAAAGCGAAAGTGGTAATGCCCGATGGTACAACCGTAGAAGT AAACAAAGGTACTCCACAAGGAGGCATCCTCTCCCCTCTTCTATCAAACATCGTTTTAAATGAACTTGATTGGTGGATTG CAAGCAATCGGGAGGAAATGCCGACAAGGACAAGTATCAACGAAATACGGGCAAATGGAACATTGGACAGATCCAATAAG TACAAGGCGTTAAGGAAGAGTAATCTTAAAGAGTGCTTTATGGTCAGATATGCTGACGACTTTAAGATCTTCTGTCCAGA TTACAAAACCGCAACGAGAATTTTTCACGCAACTAAGCTGTGGTTAAGAGACAGACTTCATTTAGAAATTAGTGAAGAAA AATCAAAAATCGTCAACTTGAAAAAGGAGTATTCCGAATTCCTGGGGTTTGAAATGAAAGTAATAAAGCATGGTAATAAG TACAAGGTGAAGAGTCACATTTGTAAAAAAGCAAAAGAGAGAATCGCGAATGAATTAAAAGAGATCATCAAACAAATCAA ATATCCAAAAGGAGATTTGGACGAGTTACGAAAAATCGGTCTTTATAATTCTAAAGTGATTGGTATCCATCAGTATTACA AGATTGCCACAATGGTCAGTCAAGATCTCTCAGAAATTGCTTATCAAATAAAAGGCTCTCTTGAAAACAACAAATTGAAA AAAAGGATAAGCAAAACGGGAGCAACGCAGGGATATATCAAGGAAGTGTACGGTCAAAGCCAACAGCTAAGATATATCAG AAACACTCCCCTTGTCCCTCTTGCCTATATAACGCATCAAAGTCCTATGTTCAAAAGGCGTGAGATAAACAAATACACGC CATCGGGCAGAGCGTTCATTCATAAGCAACTGGAATCTGTTGATTTAGGAACATTGAAGTGGCTCATGCAAAATCCAGTT AAACAAAGAAGCGTCGAATACAACGACAATCGCCTCTCACTCTACTCTGCTCAAAAAGGTAGATGTGCAGTCACTGGAAA TTTACTCATGCCATTTGATATCCACCGTCATCACAAAGTCCCTCTCGATAGCGGAGGAACTGATGCTTATTCCAACCTTG TACTTATAAGTCGTGAAGTTCACGAACTCATCCATGCGAAACTTTCAGAAGCTATTAATGCCTACATGACGAAACTTAAT CTTACACAACCTCAATTGAGAAAGTTAAACAAATTACGAATTATAATTGGCAATGAAGAAATAATTGAGTAA Protein sequence : MWDRIIQQCILQVLEPIGEAKFHVRSNGFRPNRSTEHALAQCYKMAQQQNLHFVVDIDIKGFFDNVNHGKLLKQIWAMGI QDKNLLCIISKMLKAKVVMPDGTTVEVNKGTPQGGILSPLLSNIVLNELDWWIASNREEMPTRTSINEIRANGTLDRSNK YKALRKSNLKECFMVRYADDFKIFCPDYKTATRIFHATKLWLRDRLHLEISEEKSKIVNLKKEYSEFLGFEMKVIKHGNK YKVKSHICKKAKERIANELKEIIKQIKYPKGDLDELRKIGLYNSKVIGIHQYYKIATMVSQDLSEIAYQIKGSLENNKLK KRISKTGATQGYIKEVYGQSQQLRYIRNTPLVPLAYITHQSPMFKRREINKYTPSGRAFIHKQLESVDLGTLKWLMQNPV KQRSVEYNDNRLSLYSAQKGRCAVTGNLLMPFDIHRHHKVPLDSGGTDAYSNLVLISREVHELIHAKLSEAINAYMTKLN LTQPQLRKLNKLRIIIGNEEIIE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EF2326 | NP_815981.1 | group II intron reverse transcriptase maturase | Not tested | Not named | Protein | 4e-131 | 56 |
| ef0012 | AAM75218.1 | EF0012 | Not tested | Not named | Protein | 1e-76 | 41 |
