Gene Information

Name : EIO_2657 (EIO_2657)
Accession : YP_003965034.1
Strain : Ketogulonicigenium vulgare Y25
Genome accession: NC_014625
Putative virulence/resistance : Virulence
Product : Periplasmic solute binding protein family
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2563419 - 2564324 bp
Length : 906 bp
Strand : -
Note : -

DNA sequence : 
ATGTCTGGGACGATGATGCGTTTGCTGGGTGCTGTTGCGGCAACGGCGCTGATGACAAACGCGGCGATGGCGAATGATGC
ACGGCTGAAAGTGGTGACCACCTTTACCGTGCTGGCCGATATGGCGCAGCGCGTGGCGGGTGATGCGGCAGATGTCGTGT
CGATCACCGTGCCCGGTGCGGAAATCCACGGATACGAGCCGACGCCCCAAGATATCGTCCGCGCCCAAGGGGCCGATCTG
ATCCTGTGGAACGGGTTGAATCTGGAACTGTGGTTCCAGCAATTCCTGAACAATTTGGGGGATGTGCCCTCGGTCACGCT
GACCGACGGGATTGATCCGATTTCGATTTCTGGCGGGGATTATGACGGCCGTCCCAATCCCCATGCGTGGATGGGTCTGG
ATAACGCCATCATCTATATCAACAATATCGAAGCGGCCCTTGCGCAGCACGACCCGGGCAATGCGAGCATTTATGCCGCG
AATGCCGATGCCTATCGCGACGAGCTGCGCGCGGTGCTAGAGCCATTGCGGGCCGAGATCGCCGCCGTTCCCGAGGCGCA
GCGCTGGTTGGTCACCTGCGAAGGCGCGTTCAGCTATCTCGCCCGCGATTTTGGTCTGCACGAGCTGTATCTGTGGCCGA
TGAACGCGGACCAGATGGGCACGCCGCGCCAGGTGCGCGCGGTCATCGACGGCGTGCGCGAACATCATATTCCGGTCGTC
TTTTGCGAGAGTACCGTCAACACCGGCCCCGCCAAACAGGTCGCGCGCGAGACGGGCGCCACCTATGGCGGTGAGCTTTA
CGTCGATAGCCTGTCCGAACCCGATGGCCCGGTGCCGACATATCTCGATTTGTTGCGTGTGACGTCGGAAACCGTTGCGC
GCGGCCTGACCGGCGCGGCACAATAA

Protein sequence : 
MSGTMMRLLGAVAATALMTNAAMANDARLKVVTTFTVLADMAQRVAGDAADVVSITVPGAEIHGYEPTPQDIVRAQGADL
ILWNGLNLELWFQQFLNNLGDVPSVTLTDGIDPISISGGDYDGRPNPHAWMGLDNAIIYINNIEAALAQHDPGNASIYAA
NADAYRDELRAVLEPLRAEIAAVPEAQRWLVTCEGAFSYLARDFGLHELYLWPMNADQMGTPRQVRAVIDGVREHHIPVV
FCESTVNTGPAKQVARETGATYGGELYVDSLSEPDGPVPTYLDLLRVTSETVARGLTGAAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 1e-81 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 9e-82 63
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-81 63
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 1e-81 63
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 1e-81 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EIO_2657 YP_003965034.1 Periplasmic solute binding protein family BAC0349 Protein 5e-82 63
EIO_2657 YP_003965034.1 Periplasmic solute binding protein family BAC0439 Protein 3e-77 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EIO_2657 YP_003965034.1 Periplasmic solute binding protein family VFG0525 Protein 5e-82 63