Gene Information

Name : sitB (EIO_2656)
Accession : YP_003965033.1
Strain : Ketogulonicigenium vulgare Y25
Genome accession: NC_014625
Putative virulence/resistance : Virulence
Product : Mn+2/Fe+2 ABC transporter ATPase SitB
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 2562479 - 2563375 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCCACCCCACCCCATCCCCCGCCCCGCAGCATGACAGCGATCCGGGCGGCGGGATCCACGCGGAGGGCATCACCGT
TACCTATCGCAATGGACATACCGCCCTACGCGATGCCAGTTTCGAAATCCCAAAGGGCACCGTTACGGCGCTTGTGGGGG
TGAACGGCGCCGGAAAATCCACGCTTTTCAAGGCGATCATGGGCTTTGTGCCCTTGGCCAAGGGGGATATCCGCCTGCTT
GGCCGTAGCGTGCGCGAGGCGTTGAAACAGAACCTTGTCGCCTATGTCCCGCAGTCCGAGGAGGTCGACTGGACCTTTCC
GGTACTGGTCGAGGATGTGGTGATGATGGGGCGCTATGGCCATATGGGCTTTTTGCGCCGCCCCTCAAAGGCGGATCACG
CGGCGGTCGATATGGCTCTTCAGCGCGTGAATATGCAAGAATTCCGGCACCGCCAGATTGGCGAGCTGTCGGGCGGCCAG
AAAAAGCGCGTCTTTCTGGCGCGCGCGCTGGCCCAAGATGGCCGCGTGATCCTGCTCGACGAGCCGTTCACCGGCGTCGA
TGTGAAAACCGAGGAACAGATTATCACCCTTTTGCGCGAGCTGCGGGACGAGGGGCGCGTGATGCTGGTCTCGACCCATA
ACCTTGGATCGGTGCCCGAGTTTTGCGACCGCGTGGTCTTGGTCAAGGGCACTGTCATTGGCTATGGTCCGACCGAGACG
ACCTTTACGCGCGAAAATCTCGAGGCAGCGTTTGGCGGCGTGTTGCGCCATTTCACTCTTGGCGGCGATGCGCTGCATGA
TGACGACGACGGTCGCCACGTGACGATCTTTAGCGATGACGAACGCCCGCTGGTGCAATATGGCGAGCGCACCCACACCC
GCGAGGGTGCGCAATGA

Protein sequence : 
MSHPTPSPAPQHDSDPGGGIHAEGITVTYRNGHTALRDASFEIPKGTVTALVGVNGAGKSTLFKAIMGFVPLAKGDIRLL
GRSVREALKQNLVAYVPQSEEVDWTFPVLVEDVVMMGRYGHMGFLRRPSKADHAAVDMALQRVNMQEFRHRQIGELSGGQ
KKRVFLARALAQDGRVILLDEPFTGVDVKTEEQIITLLRELRDEGRVMLVSTHNLGSVPEFCDRVVLVKGTVIGYGPTET
TFTRENLEAAFGGVLRHFTLGGDALHDDDDGRHVTIFSDDERPLVQYGERTHTREGAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-92 73
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-92 73
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-92 73
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 3e-92 73
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-92 73

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003965033.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0350 Protein 2e-92 73
sitB YP_003965033.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0440 Protein 4e-83 66
sitB YP_003965033.1 Mn+2/Fe+2 ABC transporter ATPase SitB BAC0400 Protein 3e-51 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_003965033.1 Mn+2/Fe+2 ABC transporter ATPase SitB VFG0526 Protein 2e-92 73