Gene Information

Name : EIO_2654 (EIO_2654)
Accession : YP_003965031.1
Strain : Ketogulonicigenium vulgare Y25
Genome accession: NC_014625
Putative virulence/resistance : Virulence
Product : Mn+2/Fe+2 ABC transporter inner membrane protein SitD
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2560786 - 2561619 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence : 
ATGCTGGATACATTGCTGCTGCCGTTCCAATTCGCCTTTATGCAAAACGCCTTTTTCATCGCGGCAATTGTCGCGGTGCC
CACTGCGCTGCTGTCGTGCTTTTTGGTGCTCAAAGGCTGGGCGCTGATGGGCGATGCGGTCAGCCATGCCGTGCTGCCGG
GGATCGTGCTGGCCTATATCTTTGGCATCCCGTTGATATTCGGCGCTTTTGCGGCTGGGCTGTTTACATCCATTGCAACG
GGATATCTGGCTGAAAACAGCCGCGTGAAACAAGACACAGTCATGGGGGTGGTGTTCTCGGGGATGTTTGGCCTTGGGAT
CGTGCTTTACACATCGATCACCTCGGATGCGCATCTCGACCATATCCTGTTCGGCAATATGCTGGGCGTCGGGGCGGATG
ATTTGTGGACGGCGGGCGTGATCGCGCTGGTGGTGTCGGTGCTGCTGCTGCTGAAGTGGAAGGATCTGATGCTGCATGCC
TTTGATCCGGCGCAGGCGCGCGCCTCGGGGCTGCCGGTGCGTGTACTGCATTACGGGCTGCTGACGGTGCTGTCGCTGAC
GATCGTGGCGACGATGACGGCGACGGGCCTGATCCTGGCGGTAGGCCTGCTGATCGCACCGGGGGCGATTGCCTTTTTGG
TCACGCGCCGCTTTGGCAAGATGCTGGCGGTTGCCGTTGCTGTCTGTCTGTTTGGGATGCTGGGCGGGGTCTATGCCAGC
TTTTATCTGGACAGCGCCCCCGCGCCGACGGTCGTGTTGATCCTGACCGTGCTGTTTCTGGCCGCCTTTGCCCGCAAATC
TTATCTGCAGCGCAAGACGGCGGCCATGTTGTAG

Protein sequence : 
MLDTLLLPFQFAFMQNAFFIAAIVAVPTALLSCFLVLKGWALMGDAVSHAVLPGIVLAYIFGIPLIFGAFAAGLFTSIAT
GYLAENSRVKQDTVMGVVFSGMFGLGIVLYTSITSDAHLDHILFGNMLGVGADDLWTAGVIALVVSVLLLLKWKDLMLHA
FDPAQARASGLPVRVLHYGLLTVLSLTIVATMTATGLILAVGLLIAPGAIAFLVTRRFGKMLAVAVAVCLFGMLGGVYAS
FYLDSAPAPTVVLILTVLFLAAFARKSYLQRKTAAML

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-77 63
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-77 63
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-77 63
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-77 63
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-77 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EIO_2654 YP_003965031.1 Mn+2/Fe+2 ABC transporter inner membrane protein SitD BAC0352 Protein 1e-77 63
EIO_2654 YP_003965031.1 Mn+2/Fe+2 ABC transporter inner membrane protein SitD BAC0442 Protein 2e-64 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EIO_2654 YP_003965031.1 Mn+2/Fe+2 ABC transporter inner membrane protein SitD VFG0528 Protein 1e-77 63