Gene Information

Name : EIO_0011 (EIO_0011)
Accession : YP_003962508.1
Strain : Ketogulonicigenium vulgare Y25
Genome accession: NC_014625
Putative virulence/resistance : Virulence
Product : chaperone protein clpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 8711 - 11323 bp
Length : 2613 bp
Strand : +
Note : -

DNA sequence :
ATGAACTTAGAGAAGTTCACCGAGCGGTCTCGTGGTTTTTTGCAAGCCGCTCAGACGATTGCCATGCGCGAAGGGCATCA
GCGCCTTTTGCCCGAACATATTCTGAAAGCCCTGCTGGACGATCCCGAAGGTCTGTCCGCCAATCTGATCAACCGCGCAG
GTGGCGCGGCCGATCGCGTGCGCGAGGCTGTGGATCTGGCTGTCAGCCGCCTGCCGAAAGTGTCGGGCGATGCGGGGCAG
GTGTACCTTGATTCGCTGACCGGCCGCGTGCTGGACGAGGCGGAACAGATCTCGACCAAGGCGGGCGATAGTTTCGTCAC
CGTGGAACGGCTGCTGACGGCGCTGGCGCTGGTCAAGTCCAAGGCGAAAGAGGCGCTGGACGCCGGTGCCGTGACGCCGC
AGGGGCTGAACACCGCCATCAATGATATCCGCAAGGGTCGCACCGCCGATAGTGCCGGGGCCGAGGACGGCTTTGACGCG
CTGAAGAAATATGCGCGCGACCTGACCGAGGATGCCGCGGCCGGCAAGATCGACCCGATCATTGGCCGGGACGAGGAAAT
CCGCCGCGCCATGCAGGTGCTGTCGCGCCGCACCAAGAATAACCCGATCCTGATCGGCGAGCCGGGCGTGGGTAAGACCG
CGATTGCCGAGGGCCTTGCTCTGCGCATCATCAACGGCGACGTGCCTGAATCGTTGCGCAACAAAAAGCTGTTGGCGCTG
GATATGGGGTCGCTGATCGCCGGTGCGAAATATCGCGGCGAATTCGAGGAACGTCTGAAGTCGATCCTGAAAGAGATCGA
AGCCGCCGCGGGCGAGGTGATCTTGTTCATTGACGAGATCCACACGCTGGTCGGTGCCGGCAAGGCCGATGGTGCGATGG
ATGCGGCGAACCTGATCAAGCCTGCGCTGGCACGGGGCGAGTTGCATTGCGTCGGCGCGACCACGCTGGACGAATACCGT
AAGTATATAGAGAAGGACGCCGCGCTCGCCCGCCGGTTCCAGCCCATCGTCGTGGCCGAACCCAATGTCGAGGATACGAT
CAGCATCCTGCGCGGCATCAAAGAGAAATACGAGCTGCACCACGGGGTGCGGATCTCGGATTCGGCTTTGGTGGCGGCGG
CGCAATTGTCGCATCGCTATATCACCGACCGTTTCCTGCCCGATAAGGCCATCGACCTTGTGGACGAGGCTGCCAGCCGT
CTGCGCATGGAAGTGGACAGCAAGCCCGAGGAGCTCGACGCGCTGGACCCCGAAGTGCTGCAAAAGCAGATCGAGGCCGA
GGCGCTGAAGAAGGAAGATGACACCGCCAGCAAGGATCGCCTTGAAAAGCTGGAACGTGAGCTGTCGGATCTGCAAGAAC
GCGCCGCCAGCCTGACCGCCAAATGGCAGTCGGAACGTGACCAGATGGAAGCTGCGCGCGGCCTGAAAGAAAAGCTGGAA
AAGGCACGGGCCGAGCTGGAGATCGCCAAGCGCGAGGGGAACCTCGGCAAGGCGGGCGAGCTGTCCTATGGCATTATCCC
GCAGCTGGAACGCGATATCGCGGCGGCGGATACGGCAGAAAGCGTCATGGTCGAAGAGACCGTCCGCCCCGAGCAGATCG
CCGAAGTGGTCGAGCGCTGGACCGGTATCCCGACCGCCCGCATGCTGGAAGGCGAGCGCGACAAGCTGCTGCGGATGGAG
GACGAGCTGGGCCGCCGCGTCATCGGTCAGCGCGAGGCGGTCCATGCTGTCGCCAACGCCGTCCGCCGCGCGCGCGCTGG
GCTGAATGATGAAAACCGCCCGCTGGGCAGTTTCCTGTTCCTCGGCCCGACAGGTGTGGGCAAGACCGAGCTGACCAAGG
CCGTGGCTGAATTCCTGTTCGACGACGACACTGCGATGGTGCGGATCGACATGTCGGAATTCATGGAAAAGCATTCGGTC
GCGCGACTGATCGGTGCGCCTCCGGGCTATGTCGGCTATGAAGAAGGCGGCGTTCTGACCGAGGCCGTGCGGCGCAGACC
CTATCAGGTCGTGCTGTTCGACGAGGTGGAAAAGGCCCACCCCGATGTGTTCAACGTTCTGCTGCAAGTGCTGGACGACG
GGATGCTGACGGATGGCCAGGGGCGCACGGTCGACTTCAAACAGACGCTGATCGTGCTGACATCGAACCTTGGCTCGCAA
GCGCTGTCGATGCTGCCCGAAGGGGTGGGCAAAGACGAGGCCAAGGACGAGGTGATGGCCGCCGTGCGCGGACATTTCCG
GCCCGAGTTCCTGAACCGTCTGGATGAGATCATCATCTTTGACCGGCTGAGCCGCGCCGACATGGACGGGATCGTCACGA
TCCAGTTGAAGCGTCTGGAAAACCGTCTGGCGGCGCGCAAGGTGACGCTGGCGCTGGACAGTTCCGCCCGCACATGGCTG
GCGGATGAGGGCTATGATCCGGTGTTCGGCGCCCGCCCGCTGAAACGCGTGATCCAGCGCGCCCTGCAAGACCCGCTGGC
CAGCATGTTGCTGTCGGGCGAGATCTTGGACGGCACCGAGATCCCGGTCACTGCCGGGGCGCATGGTCTGGTGGTGGGAA
GCCGGGTCGCGGATGCCCAAAAAGACCACGGGGCCGAGCCTGCGATCCACTAA

Protein sequence :
MNLEKFTERSRGFLQAAQTIAMREGHQRLLPEHILKALLDDPEGLSANLINRAGGAADRVREAVDLAVSRLPKVSGDAGQ
VYLDSLTGRVLDEAEQISTKAGDSFVTVERLLTALALVKSKAKEALDAGAVTPQGLNTAINDIRKGRTADSAGAEDGFDA
LKKYARDLTEDAAAGKIDPIIGRDEEIRRAMQVLSRRTKNNPILIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLLAL
DMGSLIAGAKYRGEFEERLKSILKEIEAAAGEVILFIDEIHTLVGAGKADGAMDAANLIKPALARGELHCVGATTLDEYR
KYIEKDAALARRFQPIVVAEPNVEDTISILRGIKEKYELHHGVRISDSALVAAAQLSHRYITDRFLPDKAIDLVDEAASR
LRMEVDSKPEELDALDPEVLQKQIEAEALKKEDDTASKDRLEKLERELSDLQERAASLTAKWQSERDQMEAARGLKEKLE
KARAELEIAKREGNLGKAGELSYGIIPQLERDIAAADTAESVMVEETVRPEQIAEVVERWTGIPTARMLEGERDKLLRME
DELGRRVIGQREAVHAVANAVRRARAGLNDENRPLGSFLFLGPTGVGKTELTKAVAEFLFDDDTAMVRIDMSEFMEKHSV
ARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGMLTDGQGRTVDFKQTLIVLTSNLGSQ
ALSMLPEGVGKDEAKDEVMAAVRGHFRPEFLNRLDEIIIFDRLSRADMDGIVTIQLKRLENRLAARKVTLALDSSARTWL
ADEGYDPVFGARPLKRVIQRALQDPLASMLLSGEILDGTEIPVTAGAHGLVVGSRVADAQKDHGAEPAIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-101 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EIO_0011 YP_003962508.1 chaperone protein clpB VFG2076 Protein 4e-114 44