Gene Information

Name : ELI_4554 (ELI_4554)
Accession : YP_003962451.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Virulence
Product : NAD dependent epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 4272570 - 4273544 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence : 
ATGGGATATAAGCATTTGATATTTCCGAAGGGAAGTCGCTTTCTGGTGACAGGCGGGGCGGGCTTTATTGGCTCCGCTGT
CTGCGAGGCACTGCTTTCCATGGGCTATTTTGTCCGCTGTCTGGACGATCTGTCAACTGGAAGTAAAGAAAATATCCGGC
CCTTTTTTAATAATCCCGGCTTTGAGTTTATAAAGGGGGATATTCAGGATTATGACATCTGTCTGGAGGCATGTGGAGGA
ATAGACTATGTCTCGCACCAGGCGGCTTGGGGCAGCGTGCCCCGCAGCATCAAACTGCCGCTGCTTTACGAGGGCATCAA
TGTCAAGGGAACACTGAATATGCTGGAGGCGGCAAGACAGAAGGGCGTCAGGCGTTTTGTTTATGCTTCGTCCTCATCGG
TTTACGGCGATGAGGAGAGACTCCCTAAAACAGAAAGCCAAATGGGAAACTGCCTGTCGCCCTATGCCCTGACCAAGAAA
ACGGCGGAGGAATACGCAGGGCTATACACCAGGCTTTATGGCCTTGAAACCATCGGATTCCGCTATTTTAATGTTTTTGG
AAAACGCCAGAATCCTGAAGGCGTTTACGCTGCGGTTATACCGAAATTTGTCAAAAGCCTGATGGCTGGCGAGGCACCCC
GGATCAATGGCGACGGCAGCCAGTCCAGAGATTTTACCTATATTGAAAACGCAGTGGAGGCAAACCTGAAGGGAATGCTG
GCACCGAAGGAAGCGGCCGGAGCCGCATACAATATTGCCTGCGGCGGCCAGATCAGCCTGAACAGGCTGTATTATACCCT
CTGCGGACTTTTGAACCGGGAGCTGCCCCCGGTTTACGGACCAGAGCGTCCGGGAGATATTCGCCATTCCTGTGCGGATA
TTACAGCGGCCAGGGAATTGCTGAACTATGATCCGGATTACAGCTTTGAGGATGGTATTGAGAAAACCATTGAATGGTAC
AGGGAGCATATATAA

Protein sequence : 
MGYKHLIFPKGSRFLVTGGAGFIGSAVCEALLSMGYFVRCLDDLSTGSKENIRPFFNNPGFEFIKGDIQDYDICLEACGG
IDYVSHQAAWGSVPRSIKLPLLYEGINVKGTLNMLEAARQKGVRRFVYASSSSVYGDEERLPKTESQMGNCLSPYALTKK
TAEEYAGLYTRLYGLETIGFRYFNVFGKRQNPEGVYAAVIPKFVKSLMAGEAPRINGDGSQSRDFTYIENAVEANLKGML
APKEAAGAAYNIACGGQISLNRLYYTLCGLLNRELPPVYGPERPGDIRHSCADITAARELLNYDPDYSFEDGIEKTIEWY
REHI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 9e-59 46
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 9e-59 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_4554 YP_003962451.1 NAD dependent epimerase VFG0430 Protein 4e-59 46