Gene Information

Name : ELI_0456 (ELI_0456)
Accession : YP_003958435.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 436183 - 436884 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence :
ATGATACGGCTCTCGCATATTGAAAAAAGTTACTGTCTGGGCAGTGAGGCTGTCCAGGCACTCTCCGACATCAGTCTGCA
TGTCAGGCCAGGCGAGTTTGTCTCTATTGTCGGGCCCTCCGGCTCTGGAAAGTCCACTCTCATGAATATTCTCGGGCTGC
TGGACATCCCGGATTCCGGCGCCTATTATCTGGATGGCCAGGAGGTCAGCACCCTGTCGGACAACGGACTGGCAGCACTG
CGCAACCAGAAGATCGGCTTTGTTTTTCAAAATTTCAATCTTCTGAGTAAGCTGAGCGCCCTGGAAAACGTGAAGCTCCC
ACTGAGTCTTCGGGGCATCCGTCAAAAAGAAATGACTGCTGCCGCCCATGACTACCTGCAGCGCGTTGGTCTCGGGGGGC
GTGAAAGGCACATCCCCTCGCAGCTCTCAGGCGGTCAGCAGCAGCGCGTCGCCATCGCCCGGGCCCTCATCGGACAGCCG
GAGATCATTCTGGCCGACGAGCCGACCGGCGCGTTGGATTCAAAGACCAGCATTGAAATCATGTCCCTGTTCCAGCGGCT
CAACCAGCAGGGGCAGACCATTGTTCTCATCACCCACAATCTTGGCCTGGCCCGGGAAACCGGCCGGGTGCTCCAGATCT
TTGACGGCAGGCTCTGCGAGGACACGTCAGGAGGTGCGCCATGCGGCTGTCCACAATCCTGA

Protein sequence :
MIRLSHIEKSYCLGSEAVQALSDISLHVRPGEFVSIVGPSGSGKSTLMNILGLLDIPDSGAYYLDGQEVSTLSDNGLAAL
RNQKIGFVFQNFNLLSKLSALENVKLPLSLRGIRQKEMTAAAHDYLQRVGLGGRERHIPSQLSGGQQQRVAIARALIGQP
EIILADEPTGALDSKTSIEIMSLFQRLNQQGQTIVLITHNLGLARETGRVLQIFDGRLCEDTSGGAPCGCPQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-37 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-36 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-38 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_0456 YP_003958435.1 ABC-type antimicrobial peptide transport system NC_012469.1.7686878. Protein 1e-56 55
ELI_0456 YP_003958435.1 ABC-type antimicrobial peptide transport system NC_008702.1.4606598. Protein 3e-44 49
ELI_0456 YP_003958435.1 ABC-type antimicrobial peptide transport system CP001581.1.gene798.p Protein 2e-42 46
ELI_0456 YP_003958435.1 ABC-type antimicrobial peptide transport system CP001581.1.gene598.p Protein 1e-38 43