Gene Information

Name : ELI_3080 (ELI_3080)
Accession : YP_003961012.1
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1086
EC number : -
Position : 2846637 - 2848511 bp
Length : 1875 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAAGATTCCAAGGATATGGCAGTACGTGTCGCATTCCTGATTTTTTTGGATGCTGTGGTACTCTTTTTATCCTA
TTTATTCGCGTTTTTGCTGACTTACAATTTCAAAATTCCCTTTAATTTTGTCAGTGGCGCGCGTTGGTTTTTAGCCATGG
GGATCGGCATTAAGGTGGTTGTTTTTTTTATCACTGGTATGTACAACACCCTCTGGCGCTATGCAAGTATTGAGGAGCTC
TGGCAGATCACCTTTTCTGTTATTCTTGCGAACATTCTGACCTTTGTGCTGTACTTTGCCATCGGTGCAGGGGTTCCGAC
AACTGTTCAGATTCTGTCATTTGTGTTTGATTTGATCATGGTAGGCGCAATCCGCATTTTTTATCGGACAGGCAGGCGCA
TAAAACAAGGCGTCGGAGGTAAGGGAAACAGCAGGAATGTACTGATTGTCGGCGCAGGAGAAGCGGGTATTAAGATTCTG
AGGGAGCTGGCGGCAGGCGAAATGAAAAGTTATGTCGTTGGTTTTGTGGATGACAATGTCTATAAACAGAAAAAGAAAAT
CAATGGTTTGACAGTCTTAGGCGGCCGAGAAGATATTCCCGATATTGTCGAGGATGAACAGGTCAACGAAATCATTATTG
CGCTGCCGTCTGTTCCGAAAAAGGAAATGAATGAAATCGCGGAGATCTGCCATAAGACAGGACGTCCAGTCCGGGTTTTA
CCCAGCTTTGATGATATCCTGAATTATGACGTCAGCCTCAGCAAGTTAAGAGATCTGCAGATAGAGGATTTACTGGACCG
GGATGAAATCCATCTGGATAAAAGTGTCATTTCTGAGTTTATCAGGGGCAAAGTGGTGCTGGTGACGGGTGGTGCGGGCT
CTATCGGCTCTGAGCTTTGCCGGCAGATTATCAAGTACCAGCCGAAGCAGCTTGTTATACTGGATATTTATGAGAATACA
CTGTATTATTTGGAACTGGAGCTGCGGCGTTATATCCACGAACTGGAAATTGAAAGTGGCTATGGCATACGCCTGGATCT
GGAGATTACAAGTATTCGCGATAAAGCCAGTGTCAACAGCCTGTTTGAACGTTATCGTCCGCAGGTAGTCTTCCACGCGG
CGGCGCATAAGCATGTCCCGCTGATGGAGAAGACGCCAAAGGAAGCGGTAAAAAACAACATTTTTGGGACAAGAAACGTG
TTGGACGCCTGTGTTGAGTATCAAGTTGAAAAATTTGTGCAGATATCCACAGACAAGGCTGTTAAGCCAACCAATGTGAT
GGGAACAACCAAGCGCATCTGTGAAATGCTGATTCAGCTTTACGATCAGCATAATCAAACGGAGTTCGTCGCTGTTCGTT
TTGGAAATGTCCTCGGAAGCAATGGCAGCGTTATTCCCATATTTAAAGAACAAATTGCAAATGGAGGACCGCTGACAGTT
ACCCATCCCGATATAGAAAGGTTTTTCATGACCATTCCCGAAGCAACACAGCTGGTTCTTCAGGCTGGCAGTATCGCCCA
TGGTGGAGAAATCTTTGTGCTGGATATGGGAGAACCGGTTAAAATTAAGGATTTGGCTGAGCGTATGGTCCGCCTCTCAG
GCTATGAGCCTTACACAGAGATGCCGATTGTCTTTTCAGGATTGAGGCCGGGGGAAAAATTATACGAAGAGCTTTCTTAC
GATATGGCTGAATTTGATAAAACACGGTATAAAGATATTTTTGTTGAAAAGCCAGAGGTTTTTGATGAAATAGTAATATG
TGATGAGCTTGAAAAATTGAAACAAATTGTCGATGGTGGAACAATGTCTGAGGTGATTGACCAATTGAAAGTAATCGTTC
CAGACTATCACCCAAACCGTGAAACTGCTATTTAA

Protein sequence :
MKKDSKDMAVRVAFLIFLDAVVLFLSYLFAFLLTYNFKIPFNFVSGARWFLAMGIGIKVVVFFITGMYNTLWRYASIEEL
WQITFSVILANILTFVLYFAIGAGVPTTVQILSFVFDLIMVGAIRIFYRTGRRIKQGVGGKGNSRNVLIVGAGEAGIKIL
RELAAGEMKSYVVGFVDDNVYKQKKKINGLTVLGGREDIPDIVEDEQVNEIIIALPSVPKKEMNEIAEICHKTGRPVRVL
PSFDDILNYDVSLSKLRDLQIEDLLDRDEIHLDKSVISEFIRGKVVLVTGGAGSIGSELCRQIIKYQPKQLVILDIYENT
LYYLELELRRYIHELEIESGYGIRLDLEITSIRDKASVNSLFERYRPQVVFHAAAHKHVPLMEKTPKEAVKNNIFGTRNV
LDACVEYQVEKFVQISTDKAVKPTNVMGTTKRICEMLIQLYDQHNQTEFVAVRFGNVLGSNGSVIPIFKEQIANGGPLTV
THPDIERFFMTIPEATQLVLQAGSIAHGGEIFVLDMGEPVKIKDLAERMVRLSGYEPYTEMPIVFSGLRPGEKLYEELSY
DMAEFDKTRYKDIFVEKPEVFDEIVICDELEKLKQIVDGGTMSEVIDQLKVIVPDYHPNRETAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1D AAA64643.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-90 44
SSP0063 YP_300153.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 1e-84 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_3080 YP_003961012.1 hypothetical protein VFG1300 Protein 2e-88 41