Gene Information

Name : ELI_2699 (ELI_2699)
Accession : YP_003960643.2
Strain : Eubacterium limosum KIST612
Genome accession: NC_014624
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2497415 - 2498728 bp
Length : 1314 bp
Strand : -
Note : -

DNA sequence :
ATGGATCTATATCAAGCACTTAAAAGCAGACAAGAAAAACTATCCCTCATCGGCCTCGGCTACGTGGGCATGCCCATTGC
GGTCGCCTTCTCAAAGAAAGTCGACGTCATCGGCTTTGACGTTAACGCTGAAAAAGTCCGGCTTTATCAAAAAGGCATTG
ACCCCACCAAAGAGGTAGGGGATGAAGCCATTAAAAGCTGTACCGTGGATTTTACAAACGACGAGACAAAACTTCGAGAA
GCCAGGTTTCACATTGTGGCCGTTCCAACCCCGGTGAGCGAGGATAAAACACCAGATCTGACCCCCGTGGAAGGCGCCAG
CCACACCCTGGGGAGAAACCTGACCAAAGGTTCCATCGTGGTCTATGAAAGCACTGTTTATCCCGGCGTTACCGAAGAAG
TCTGCATCCCCATCTTAGAAAAAGCATCCGGCTTAAAATGCGGTAAAGATTTCAAAGTCGGCTATTCCCCAGAGCGCATT
AACCCCGGCGACAAAGTCCACCGCCTCGAGACCATTGTCAAGATTGTCTCTGGCATGGACGCAGAAACCCTAGACACCAT
TGCCAAAGTTTACGAGCTCGTCGTCGACGCCGGCGTCCACCGGGCCGAGAGCATCAAAGTCGCCGAAGCCGCCAAAGTCA
TTGAAAACAGCCAGCGGGACATCAACATCGCCTTTATGAACGAGCTGTCCATTATCTTCAACAAGATGGGCATCGACACC
CAGGCTGTTCTAAAAGCTGCCGGCACCAAGTGGAACTTCCTGAACTTTTTCCCAGGCCTCGTCGGCGGTCACTGCATCGG
GGTGGATCCCTACTACCTGACCTACAAAGCCGAACAGTTAGGCTACCACTCCCAGATCATTCTGTCCGGACGGCGCATCA
ACGACGACATGGGCAAATATGTGGCCGAAAACATCGTCAAGCAGCTGTTGAGAAAAGACATCTCCGTCAAAAACGCCAGA
GTCGCCATTTTGGGCTTTACCTTCAAAGAAGACTGCCCCGATACCCGAAACACAAAAGTCATCGACATCGTCAAAGAGCT
CAGAGACTACGGCATTGAGCCCATCCTCTGCGACCCCGAAGCCGACGCCGAAGAAGCCAAAAGAGAATACGGCGTCACAT
TTACGGATTATAAAGACCTGAAAGATATCGACTTAATCGTCATCGCCGTTGCCCACCAAAGCTTTAAAGACAAAACCCTC
AAGGACTTCGACAAACTCTATCAAAATCCAGAAGCCAAAATCCTCATGGACCTGAAAGGCATCCTGGATAAACAAACCTG
TGAAAAGCAAAACTATACCTACTGGAGGTTATAA

Protein sequence :
MDLYQALKSRQEKLSLIGLGYVGMPIAVAFSKKVDVIGFDVNAEKVRLYQKGIDPTKEVGDEAIKSCTVDFTNDETKLRE
ARFHIVAVPTPVSEDKTPDLTPVEGASHTLGRNLTKGSIVVYESTVYPGVTEEVCIPILEKASGLKCGKDFKVGYSPERI
NPGDKVHRLETIVKIVSGMDAETLDTIAKVYELVVDAGVHRAESIKVAEAAKVIENSQRDINIAFMNELSIIFNKMGIDT
QAVLKAAGTKWNFLNFFPGLVGGHCIGVDPYYLTYKAEQLGYHSQIILSGRRINDDMGKYVAENIVKQLLRKDISVKNAR
VAILGFTFKEDCPDTRNTKVIDIVKELRDYGIEPILCDPEADAEEAKREYGVTFTDYKDLKDIDLIVIAVAHQSFKDKTL
KDFDKLYQNPEAKILMDLKGILDKQTCEKQNYTYWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-113 58
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-98 56
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-98 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ELI_2699 YP_003960643.2 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 1e-98 56